Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
RNF146Q9NTX7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.49■■□□□ 1.51
RNF146Q9NTX7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF146Q9NTX7 GPX1P1-201ENST00000388829 606 ntBASIC24.49■■□□□ 1.51
RNF146Q9NTX7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF146Q9NTX7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.49■■□□□ 1.51
RNF146Q9NTX7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF146Q9NTX7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF146Q9NTX7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RNF146Q9NTX7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF146Q9NTX7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF146Q9NTX7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF146Q9NTX7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF146Q9NTX7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF146Q9NTX7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF146Q9NTX7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF146Q9NTX7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RNF146Q9NTX7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
RNF146Q9NTX7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF146Q9NTX7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RNF146Q9NTX7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF146Q9NTX7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF146Q9NTX7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.48■■□□□ 1.51
RNF146Q9NTX7 KRT18P20-201ENST00000548986 1279 ntBASIC24.48■■□□□ 1.51
RNF146Q9NTX7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.48■■□□□ 1.51
RNF146Q9NTX7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.48■■□□□ 1.51
RNF146Q9NTX7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF146Q9NTX7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF146Q9NTX7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.47■■□□□ 1.51
RNF146Q9NTX7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF146Q9NTX7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF146Q9NTX7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.47■■□□□ 1.51
RNF146Q9NTX7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF146Q9NTX7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF146Q9NTX7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC24.47■■□□□ 1.51
RNF146Q9NTX7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
RNF146Q9NTX7 AC053503.5-201ENST00000601508 636 ntBASIC24.47■■□□□ 1.51
RNF146Q9NTX7 AC005181.1-201ENST00000604782 1256 ntBASIC24.47■■□□□ 1.51
RNF146Q9NTX7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.47■■□□□ 1.51
RNF146Q9NTX7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF146Q9NTX7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RNF146Q9NTX7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF146Q9NTX7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.46■■□□□ 1.51
RNF146Q9NTX7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF146Q9NTX7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF146Q9NTX7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.46■■□□□ 1.51
RNF146Q9NTX7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RNF146Q9NTX7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF146Q9NTX7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RNF146Q9NTX7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RNF146Q9NTX7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.51
RNF146Q9NTX7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
RNF146Q9NTX7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
RNF146Q9NTX7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
RNF146Q9NTX7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC24.45■■□□□ 1.5
RNF146Q9NTX7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.45■■□□□ 1.5
RNF146Q9NTX7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.45■■□□□ 1.5
RNF146Q9NTX7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.45■■□□□ 1.5
RNF146Q9NTX7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.45■■□□□ 1.5
RNF146Q9NTX7 AC010536.3-201ENST00000620306 533 ntBASIC24.45■■□□□ 1.5
RNF146Q9NTX7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC24.45■■□□□ 1.5
RNF146Q9NTX7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RNF146Q9NTX7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.45■■□□□ 1.5
RNF146Q9NTX7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF146Q9NTX7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RNF146Q9NTX7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.44■■□□□ 1.5
RNF146Q9NTX7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RNF146Q9NTX7 CNN2P6-201ENST00000439038 900 ntBASIC24.44■■□□□ 1.5
RNF146Q9NTX7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.44■■□□□ 1.5
RNF146Q9NTX7 AL121832.2-201ENST00000610979 668 ntBASIC24.44■■□□□ 1.5
RNF146Q9NTX7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.44■■□□□ 1.5
RNF146Q9NTX7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC24.44■■□□□ 1.5
RNF146Q9NTX7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF146Q9NTX7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
RNF146Q9NTX7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RNF146Q9NTX7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF146Q9NTX7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC24.43■■□□□ 1.5
RNF146Q9NTX7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF146Q9NTX7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24.43■■□□□ 1.5
RNF146Q9NTX7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.43■■□□□ 1.5
RNF146Q9NTX7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.43■■□□□ 1.5
RNF146Q9NTX7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RNF146Q9NTX7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF146Q9NTX7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC24.43■■□□□ 1.5
RNF146Q9NTX7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF146Q9NTX7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.43■■□□□ 1.5
RNF146Q9NTX7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
RNF146Q9NTX7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF146Q9NTX7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RNF146Q9NTX7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.42■■□□□ 1.5
RNF146Q9NTX7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF146Q9NTX7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF146Q9NTX7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF146Q9NTX7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF146Q9NTX7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF146Q9NTX7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF146Q9NTX7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.42■■□□□ 1.5
RNF146Q9NTX7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF146Q9NTX7 AC083906.2-201ENST00000511578 360 ntBASIC24.42■■□□□ 1.5
RNF146Q9NTX7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms