Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.65■□□□□ 0.9
TUBB1Q9H4B7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBB1Q9H4B7 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.65■□□□□ 0.9
TUBB1Q9H4B7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBB1Q9H4B7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBB1Q9H4B7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TUBB1Q9H4B7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBB1Q9H4B7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBB1Q9H4B7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TUBB1Q9H4B7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TUBB1Q9H4B7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TUBB1Q9H4B7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TUBB1Q9H4B7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 AL356441.2-201ENST00000443009 864 ntBASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TUBB1Q9H4B7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
TUBB1Q9H4B7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB1Q9H4B7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB1Q9H4B7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB1Q9H4B7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.63■□□□□ 0.89
TUBB1Q9H4B7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB1Q9H4B7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.63■□□□□ 0.89
TUBB1Q9H4B7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBB1Q9H4B7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TUBB1Q9H4B7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.63■□□□□ 0.89
TUBB1Q9H4B7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TUBB1Q9H4B7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TUBB1Q9H4B7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBB1Q9H4B7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TUBB1Q9H4B7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBB1Q9H4B7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBB1Q9H4B7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBB1Q9H4B7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.62■□□□□ 0.89
TUBB1Q9H4B7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
TUBB1Q9H4B7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.62■□□□□ 0.89
TUBB1Q9H4B7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBB1Q9H4B7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBB1Q9H4B7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TUBB1Q9H4B7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.62■□□□□ 0.89
TUBB1Q9H4B7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TUBB1Q9H4B7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBB1Q9H4B7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.62■□□□□ 0.89
TUBB1Q9H4B7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBB1Q9H4B7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.61■□□□□ 0.89
TUBB1Q9H4B7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBB1Q9H4B7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TUBB1Q9H4B7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBB1Q9H4B7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBB1Q9H4B7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBB1Q9H4B7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TUBB1Q9H4B7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TUBB1Q9H4B7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.61■□□□□ 0.89
TUBB1Q9H4B7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.61■□□□□ 0.89
TUBB1Q9H4B7 AL138724.1-201ENST00000606771 1088 ntBASIC20.61■□□□□ 0.89
TUBB1Q9H4B7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TUBB1Q9H4B7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBB1Q9H4B7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBB1Q9H4B7 AC003102.1-202ENST00000563394 1796 ntBASIC20.61■□□□□ 0.89
TUBB1Q9H4B7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBB1Q9H4B7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBB1Q9H4B7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBB1Q9H4B7 SYT6-210ENST00000641643 1587 ntBASIC20.6■□□□□ 0.89
TUBB1Q9H4B7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBB1Q9H4B7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBB1Q9H4B7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TUBB1Q9H4B7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TUBB1Q9H4B7 SLC47A1P1-202ENST00000449666 945 ntBASIC20.6■□□□□ 0.89
TUBB1Q9H4B7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.6■□□□□ 0.89
TUBB1Q9H4B7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.6■□□□□ 0.89
TUBB1Q9H4B7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.6■□□□□ 0.89
TUBB1Q9H4B7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.6■□□□□ 0.89
TUBB1Q9H4B7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TUBB1Q9H4B7 AC136469.2-201ENST00000623944 1028 ntBASIC20.6■□□□□ 0.89
TUBB1Q9H4B7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TUBB1Q9H4B7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TUBB1Q9H4B7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBB1Q9H4B7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBB1Q9H4B7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBB1Q9H4B7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TUBB1Q9H4B7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TUBB1Q9H4B7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.59■□□□□ 0.89
TUBB1Q9H4B7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms