Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
VPS16Q9H269 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VPS16Q9H269 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.48■■□□□ 1.35
VPS16Q9H269 AC092171.4-201ENST00000609130 632 ntBASIC23.48■■□□□ 1.35
VPS16Q9H269 AC087239.1-201ENST00000622671 572 ntBASIC23.48■■□□□ 1.35
VPS16Q9H269 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
VPS16Q9H269 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
VPS16Q9H269 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VPS16Q9H269 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
VPS16Q9H269 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.48■■□□□ 1.35
VPS16Q9H269 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VPS16Q9H269 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
VPS16Q9H269 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.47■■□□□ 1.35
VPS16Q9H269 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
VPS16Q9H269 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.47■■□□□ 1.35
VPS16Q9H269 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VPS16Q9H269 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.47■■□□□ 1.35
VPS16Q9H269 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
VPS16Q9H269 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
VPS16Q9H269 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.47■■□□□ 1.35
VPS16Q9H269 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
VPS16Q9H269 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
VPS16Q9H269 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
VPS16Q9H269 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
VPS16Q9H269 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
VPS16Q9H269 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.46■■□□□ 1.35
VPS16Q9H269 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
VPS16Q9H269 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.46■■□□□ 1.35
VPS16Q9H269 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
VPS16Q9H269 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.46■■□□□ 1.35
VPS16Q9H269 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
VPS16Q9H269 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
VPS16Q9H269 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
VPS16Q9H269 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.46■■□□□ 1.35
VPS16Q9H269 AC104564.3-201ENST00000582367 638 ntBASIC23.46■■□□□ 1.35
VPS16Q9H269 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
VPS16Q9H269 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
VPS16Q9H269 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
VPS16Q9H269 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.46■■□□□ 1.35
VPS16Q9H269 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.35
VPS16Q9H269 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
VPS16Q9H269 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
VPS16Q9H269 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.45■■□□□ 1.34
VPS16Q9H269 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
VPS16Q9H269 SERBP1P1-201ENST00000396021 1160 ntBASIC23.45■■□□□ 1.34
VPS16Q9H269 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
VPS16Q9H269 AL356441.2-201ENST00000443009 864 ntBASIC23.45■■□□□ 1.34
VPS16Q9H269 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.45■■□□□ 1.34
VPS16Q9H269 MIR4466-201ENST00000606121 54 ntBASIC23.45■■□□□ 1.34
VPS16Q9H269 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.45■■□□□ 1.34
VPS16Q9H269 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.45■■□□□ 1.34
VPS16Q9H269 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.45■■□□□ 1.34
VPS16Q9H269 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.44■■□□□ 1.34
VPS16Q9H269 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.44■■□□□ 1.34
VPS16Q9H269 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.44■■□□□ 1.34
VPS16Q9H269 OXCT2P1-201ENST00000447263 1535 ntBASIC23.44■■□□□ 1.34
VPS16Q9H269 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VPS16Q9H269 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.44■■□□□ 1.34
VPS16Q9H269 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VPS16Q9H269 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VPS16Q9H269 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.44■■□□□ 1.34
VPS16Q9H269 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.44■■□□□ 1.34
VPS16Q9H269 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VPS16Q9H269 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
VPS16Q9H269 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.44■■□□□ 1.34
VPS16Q9H269 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
VPS16Q9H269 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.44■■□□□ 1.34
VPS16Q9H269 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VPS16Q9H269 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.43■■□□□ 1.34
VPS16Q9H269 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.43■■□□□ 1.34
VPS16Q9H269 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
VPS16Q9H269 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.43■■□□□ 1.34
VPS16Q9H269 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
VPS16Q9H269 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.43■■□□□ 1.34
VPS16Q9H269 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
VPS16Q9H269 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
VPS16Q9H269 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.43■■□□□ 1.34
VPS16Q9H269 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
VPS16Q9H269 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.43■■□□□ 1.34
VPS16Q9H269 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
VPS16Q9H269 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.43■■□□□ 1.34
VPS16Q9H269 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
VPS16Q9H269 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
VPS16Q9H269 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
VPS16Q9H269 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.42■■□□□ 1.34
VPS16Q9H269 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.42■■□□□ 1.34
VPS16Q9H269 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
VPS16Q9H269 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
VPS16Q9H269 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS16Q9H269 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS16Q9H269 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.42■■□□□ 1.34
VPS16Q9H269 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.42■■□□□ 1.34
VPS16Q9H269 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.42■■□□□ 1.34
VPS16Q9H269 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.42■■□□□ 1.34
VPS16Q9H269 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
VPS16Q9H269 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS16Q9H269 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.42■■□□□ 1.34
VPS16Q9H269 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.42■■□□□ 1.34
VPS16Q9H269 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.42■■□□□ 1.34
VPS16Q9H269 SYT6-210ENST00000641643 1587 ntBASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms