Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40CQ96S21 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40CQ96S21 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40CQ96S21 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40CQ96S21 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40CQ96S21 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40CQ96S21 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40CQ96S21 KRT8P33-201ENST00000508125 1423 ntBASIC17.31■□□□□ 0.36
RAB40CQ96S21 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RAB40CQ96S21 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB40CQ96S21 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40CQ96S21 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40CQ96S21 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB40CQ96S21 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB40CQ96S21 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40CQ96S21 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RAB40CQ96S21 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40CQ96S21 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB40CQ96S21 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40CQ96S21 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40CQ96S21 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40CQ96S21 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RAB40CQ96S21 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RAB40CQ96S21 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40CQ96S21 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40CQ96S21 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40CQ96S21 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB40CQ96S21 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40CQ96S21 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB40CQ96S21 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40CQ96S21 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAB40CQ96S21 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
RAB40CQ96S21 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40CQ96S21 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40CQ96S21 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.3■□□□□ 0.36
RAB40CQ96S21 AC103834.1-201ENST00000520383 144 ntBASIC17.3■□□□□ 0.36
RAB40CQ96S21 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40CQ96S21 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40CQ96S21 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40CQ96S21 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40CQ96S21 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40CQ96S21 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40CQ96S21 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAB40CQ96S21 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40CQ96S21 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB40CQ96S21 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB40CQ96S21 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB40CQ96S21 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40CQ96S21 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40CQ96S21 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40CQ96S21 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB40CQ96S21 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40CQ96S21 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40CQ96S21 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40CQ96S21 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40CQ96S21 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB40CQ96S21 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40CQ96S21 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40CQ96S21 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40CQ96S21 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40CQ96S21 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB40CQ96S21 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAB40CQ96S21 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RAB40CQ96S21 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB40CQ96S21 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB40CQ96S21 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.28■□□□□ 0.36
RAB40CQ96S21 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RAB40CQ96S21 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB40CQ96S21 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RAB40CQ96S21 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB40CQ96S21 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB40CQ96S21 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB40CQ96S21 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40CQ96S21 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40CQ96S21 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB40CQ96S21 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40CQ96S21 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
RAB40CQ96S21 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB40CQ96S21 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RAB40CQ96S21 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB40CQ96S21 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.27■□□□□ 0.35
RAB40CQ96S21 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.27■□□□□ 0.35
RAB40CQ96S21 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.35
RAB40CQ96S21 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB40CQ96S21 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
RAB40CQ96S21 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB40CQ96S21 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RAB40CQ96S21 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB40CQ96S21 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB40CQ96S21 C17orf82-201ENST00000623772 1530 ntBASIC17.26■□□□□ 0.35
RAB40CQ96S21 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40CQ96S21 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RAB40CQ96S21 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB40CQ96S21 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB40CQ96S21 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40CQ96S21 LINC01006-201ENST00000333319 2292 ntBASIC17.26■□□□□ 0.35
RAB40CQ96S21 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40CQ96S21 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40CQ96S21 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB40CQ96S21 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms