Protein–RNA interactions for Protein: Q96QR1

SCGB3A1, Secretoglobin family 3A member 1, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB3A1Q96QR1 LINC01529-204ENST00000636474 1715 ntBASIC15.27■□□□□ 0.04
SCGB3A1Q96QR1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCGB3A1Q96QR1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCGB3A1Q96QR1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
SCGB3A1Q96QR1 MIR6765-201ENST00000614092 87 ntBASIC15.27■□□□□ 0.04
SCGB3A1Q96QR1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCGB3A1Q96QR1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SCGB3A1Q96QR1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCGB3A1Q96QR1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCGB3A1Q96QR1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.27■□□□□ 0.03
SCGB3A1Q96QR1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SCGB3A1Q96QR1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCGB3A1Q96QR1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 AC004448.1-201ENST00000458332 883 ntBASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCGB3A1Q96QR1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 AC007952.6-201ENST00000573168 2673 ntBASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 AC003957.1-201ENST00000625108 2673 ntBASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.25■□□□□ 0.03
SCGB3A1Q96QR1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 SPCS2P3-201ENST00000500401 656 ntBASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
SCGB3A1Q96QR1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCGB3A1Q96QR1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.23■□□□□ 0.03
SCGB3A1Q96QR1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCGB3A1Q96QR1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.23■□□□□ 0.03
SCGB3A1Q96QR1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCGB3A1Q96QR1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCGB3A1Q96QR1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCGB3A1Q96QR1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCGB3A1Q96QR1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCGB3A1Q96QR1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCGB3A1Q96QR1 AC009086.3-201ENST00000623486 1008 ntBASIC15.23■□□□□ 0.03
SCGB3A1Q96QR1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCGB3A1Q96QR1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCGB3A1Q96QR1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCGB3A1Q96QR1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCGB3A1Q96QR1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCGB3A1Q96QR1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SCGB3A1Q96QR1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCGB3A1Q96QR1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCGB3A1Q96QR1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms