Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC28.43■■■□□ 2.14
NBPF4Q96M43 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC28.43■■■□□ 2.14
NBPF4Q96M43 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC28.43■■■□□ 2.14
NBPF4Q96M43 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
NBPF4Q96M43 TERF1P5-201ENST00000477545 1207 ntBASIC28.43■■■□□ 2.14
NBPF4Q96M43 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC28.43■■■□□ 2.14
NBPF4Q96M43 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC28.43■■■□□ 2.14
NBPF4Q96M43 AC068338.2-201ENST00000563278 1430 ntBASIC28.43■■■□□ 2.14
NBPF4Q96M43 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
NBPF4Q96M43 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
NBPF4Q96M43 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
NBPF4Q96M43 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
NBPF4Q96M43 AL034346.1-201ENST00000568244 1277 ntBASIC28.42■■■□□ 2.14
NBPF4Q96M43 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
NBPF4Q96M43 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
NBPF4Q96M43 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC28.42■■■□□ 2.14
NBPF4Q96M43 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC28.41■■■□□ 2.14
NBPF4Q96M43 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC28.41■■■□□ 2.14
NBPF4Q96M43 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
NBPF4Q96M43 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
NBPF4Q96M43 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC28.41■■■□□ 2.14
NBPF4Q96M43 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC28.41■■■□□ 2.14
NBPF4Q96M43 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC28.41■■■□□ 2.14
NBPF4Q96M43 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC28.41■■■□□ 2.14
NBPF4Q96M43 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC28.41■■■□□ 2.14
NBPF4Q96M43 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC28.41■■■□□ 2.14
NBPF4Q96M43 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC28.41■■■□□ 2.14
NBPF4Q96M43 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC28.41■■■□□ 2.14
NBPF4Q96M43 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NBPF4Q96M43 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NBPF4Q96M43 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
NBPF4Q96M43 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC28.4■■■□□ 2.14
NBPF4Q96M43 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
NBPF4Q96M43 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
NBPF4Q96M43 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
NBPF4Q96M43 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
NBPF4Q96M43 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
NBPF4Q96M43 AC073210.2-201ENST00000430369 194 ntBASIC28.4■■■□□ 2.14
NBPF4Q96M43 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC28.4■■■□□ 2.14
NBPF4Q96M43 RGMA-211ENST00000557420 989 ntTSL 3 BASIC28.4■■■□□ 2.14
NBPF4Q96M43 PLLP-204ENST00000569059 665 ntTSL 3 BASIC28.4■■■□□ 2.14
NBPF4Q96M43 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC28.4■■■□□ 2.14
NBPF4Q96M43 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
NBPF4Q96M43 MARS-234ENST00000630571 216 ntTSL 5 BASIC28.4■■■□□ 2.14
NBPF4Q96M43 MARS-235ENST00000630803 183 ntTSL 3 BASIC28.4■■■□□ 2.14
NBPF4Q96M43 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
NBPF4Q96M43 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
NBPF4Q96M43 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC28.4■■■□□ 2.14
NBPF4Q96M43 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
NBPF4Q96M43 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
NBPF4Q96M43 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
NBPF4Q96M43 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC28.39■■■□□ 2.14
NBPF4Q96M43 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
NBPF4Q96M43 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC28.39■■■□□ 2.14
NBPF4Q96M43 AC013268.1-206ENST00000638368 961 ntBASIC28.39■■■□□ 2.14
NBPF4Q96M43 AC112229.1-201ENST00000639295 961 ntBASIC28.39■■■□□ 2.14
NBPF4Q96M43 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
NBPF4Q96M43 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.13
NBPF4Q96M43 GCA-201ENST00000233612 1694 ntTSL 2 BASIC28.38■■■□□ 2.13
NBPF4Q96M43 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
NBPF4Q96M43 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC28.38■■■□□ 2.13
NBPF4Q96M43 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NBPF4Q96M43 BMP1-204ENST00000397814 836 ntTSL 4 BASIC28.38■■■□□ 2.13
NBPF4Q96M43 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC28.38■■■□□ 2.13
NBPF4Q96M43 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC28.38■■■□□ 2.13
NBPF4Q96M43 AC133041.1-202ENST00000642053 222 ntBASIC28.38■■■□□ 2.13
NBPF4Q96M43 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC28.38■■■□□ 2.13
NBPF4Q96M43 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NBPF4Q96M43 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NBPF4Q96M43 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
NBPF4Q96M43 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
NBPF4Q96M43 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC28.37■■■□□ 2.13
NBPF4Q96M43 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC28.37■■■□□ 2.13
NBPF4Q96M43 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC28.37■■■□□ 2.13
NBPF4Q96M43 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NBPF4Q96M43 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NBPF4Q96M43 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
NBPF4Q96M43 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC28.36■■■□□ 2.13
NBPF4Q96M43 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NBPF4Q96M43 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NBPF4Q96M43 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NBPF4Q96M43 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
NBPF4Q96M43 CYP2T1P-201ENST00000432607 1285 ntBASIC28.36■■■□□ 2.13
NBPF4Q96M43 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC28.36■■■□□ 2.13
NBPF4Q96M43 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC28.36■■■□□ 2.13
NBPF4Q96M43 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC28.36■■■□□ 2.13
NBPF4Q96M43 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NBPF4Q96M43 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
NBPF4Q96M43 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC28.36■■■□□ 2.13
NBPF4Q96M43 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
NBPF4Q96M43 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
NBPF4Q96M43 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC28.35■■■□□ 2.13
NBPF4Q96M43 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
NBPF4Q96M43 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
NBPF4Q96M43 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC28.34■■■□□ 2.13
NBPF4Q96M43 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
NBPF4Q96M43 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC28.34■■■□□ 2.13
NBPF4Q96M43 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC28.34■■■□□ 2.13
NBPF4Q96M43 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
NBPF4Q96M43 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms