Protein–RNA interactions for Protein: Q96KK3

KCNS1, Potassium voltage-gated channel subfamily S member 1, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS1Q96KK3 AL033527.3-201ENST00000566366 1196 ntBASIC16.23■□□□□ 0.19
KCNS1Q96KK3 AL031848.2-201ENST00000607670 837 ntBASIC16.23■□□□□ 0.19
KCNS1Q96KK3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KCNS1Q96KK3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.23■□□□□ 0.19
KCNS1Q96KK3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KCNS1Q96KK3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.23■□□□□ 0.19
KCNS1Q96KK3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KCNS1Q96KK3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KCNS1Q96KK3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KCNS1Q96KK3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.23■□□□□ 0.19
KCNS1Q96KK3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KCNS1Q96KK3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KCNS1Q96KK3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KCNS1Q96KK3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.22■□□□□ 0.19
KCNS1Q96KK3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KCNS1Q96KK3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.22■□□□□ 0.19
KCNS1Q96KK3 KRT8P33-201ENST00000508125 1423 ntBASIC16.22■□□□□ 0.19
KCNS1Q96KK3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KCNS1Q96KK3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.22■□□□□ 0.19
KCNS1Q96KK3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
KCNS1Q96KK3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.22■□□□□ 0.19
KCNS1Q96KK3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.22■□□□□ 0.19
KCNS1Q96KK3 BX664725.1-201ENST00000438252 379 ntBASIC16.22■□□□□ 0.19
KCNS1Q96KK3 AC009086.3-201ENST00000623486 1008 ntBASIC16.22■□□□□ 0.19
KCNS1Q96KK3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
KCNS1Q96KK3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
KCNS1Q96KK3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KCNS1Q96KK3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.22■□□□□ 0.19
KCNS1Q96KK3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KCNS1Q96KK3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
KCNS1Q96KK3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KCNS1Q96KK3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KCNS1Q96KK3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KCNS1Q96KK3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.21■□□□□ 0.19
KCNS1Q96KK3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KCNS1Q96KK3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KCNS1Q96KK3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
KCNS1Q96KK3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.21■□□□□ 0.19
KCNS1Q96KK3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.21■□□□□ 0.19
KCNS1Q96KK3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KCNS1Q96KK3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KCNS1Q96KK3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.21■□□□□ 0.19
KCNS1Q96KK3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KCNS1Q96KK3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KCNS1Q96KK3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KCNS1Q96KK3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KCNS1Q96KK3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KCNS1Q96KK3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KCNS1Q96KK3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.2■□□□□ 0.18
KCNS1Q96KK3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KCNS1Q96KK3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KCNS1Q96KK3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.2■□□□□ 0.18
KCNS1Q96KK3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
KCNS1Q96KK3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.2■□□□□ 0.18
KCNS1Q96KK3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
KCNS1Q96KK3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.2■□□□□ 0.18
KCNS1Q96KK3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.2■□□□□ 0.18
KCNS1Q96KK3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
KCNS1Q96KK3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
KCNS1Q96KK3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
KCNS1Q96KK3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
KCNS1Q96KK3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KCNS1Q96KK3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KCNS1Q96KK3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.2■□□□□ 0.18
KCNS1Q96KK3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KCNS1Q96KK3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.19■□□□□ 0.18
KCNS1Q96KK3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
KCNS1Q96KK3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KCNS1Q96KK3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KCNS1Q96KK3 AC244015.2-201ENST00000616358 1861 ntBASIC16.19■□□□□ 0.18
KCNS1Q96KK3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KCNS1Q96KK3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
KCNS1Q96KK3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KCNS1Q96KK3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.19■□□□□ 0.18
KCNS1Q96KK3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.19■□□□□ 0.18
KCNS1Q96KK3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.19■□□□□ 0.18
KCNS1Q96KK3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.19■□□□□ 0.18
KCNS1Q96KK3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
KCNS1Q96KK3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KCNS1Q96KK3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
KCNS1Q96KK3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
KCNS1Q96KK3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
KCNS1Q96KK3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
KCNS1Q96KK3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
KCNS1Q96KK3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KCNS1Q96KK3 AC021242.3-201ENST00000607598 1377 ntBASIC16.18■□□□□ 0.18
KCNS1Q96KK3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
KCNS1Q96KK3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
KCNS1Q96KK3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.18■□□□□ 0.18
KCNS1Q96KK3 LINC01006-201ENST00000333319 2292 ntBASIC16.18■□□□□ 0.18
KCNS1Q96KK3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.18■□□□□ 0.18
KCNS1Q96KK3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KCNS1Q96KK3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
KCNS1Q96KK3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KCNS1Q96KK3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KCNS1Q96KK3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KCNS1Q96KK3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.17■□□□□ 0.18
KCNS1Q96KK3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
KCNS1Q96KK3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KCNS1Q96KK3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms