Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS1Q92902 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HPS1Q92902 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS1Q92902 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS1Q92902 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS1Q92902 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS1Q92902 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.37■□□□□ 0.69
HPS1Q92902 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HPS1Q92902 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
HPS1Q92902 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HPS1Q92902 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HPS1Q92902 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS1Q92902 MIR935-201ENST00000401179 91 ntBASIC19.37■□□□□ 0.69
HPS1Q92902 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HPS1Q92902 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HPS1Q92902 AC133561.4-201ENST00000566112 224 ntBASIC19.37■□□□□ 0.69
HPS1Q92902 AL512631.2-201ENST00000604634 923 ntBASIC19.37■□□□□ 0.69
HPS1Q92902 MIR4466-201ENST00000606121 54 ntBASIC19.37■□□□□ 0.69
HPS1Q92902 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.37■□□□□ 0.69
HPS1Q92902 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HPS1Q92902 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS1Q92902 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS1Q92902 AL020996.1-203ENST00000536896 2307 ntBASIC19.36■□□□□ 0.69
HPS1Q92902 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.36■□□□□ 0.69
HPS1Q92902 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.36■□□□□ 0.69
HPS1Q92902 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS1Q92902 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS1Q92902 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.36■□□□□ 0.69
HPS1Q92902 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.36■□□□□ 0.69
HPS1Q92902 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.36■□□□□ 0.69
HPS1Q92902 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HPS1Q92902 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HPS1Q92902 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
HPS1Q92902 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
HPS1Q92902 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
HPS1Q92902 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS1Q92902 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.36■□□□□ 0.69
HPS1Q92902 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS1Q92902 FAM99A-202ENST00000538190 1989 ntBASIC19.35■□□□□ 0.69
HPS1Q92902 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPS1Q92902 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.35■□□□□ 0.69
HPS1Q92902 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
HPS1Q92902 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPS1Q92902 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPS1Q92902 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPS1Q92902 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HPS1Q92902 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.35■□□□□ 0.69
HPS1Q92902 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPS1Q92902 AC110285.6-201ENST00000617652 491 ntBASIC19.35■□□□□ 0.69
HPS1Q92902 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HPS1Q92902 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HPS1Q92902 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
HPS1Q92902 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HPS1Q92902 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HPS1Q92902 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS1Q92902 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS1Q92902 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HPS1Q92902 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.34■□□□□ 0.69
HPS1Q92902 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS1Q92902 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.34■□□□□ 0.69
HPS1Q92902 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.34■□□□□ 0.69
HPS1Q92902 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.34■□□□□ 0.69
HPS1Q92902 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.34■□□□□ 0.69
HPS1Q92902 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HPS1Q92902 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS1Q92902 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS1Q92902 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS1Q92902 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.34■□□□□ 0.69
HPS1Q92902 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
HPS1Q92902 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HPS1Q92902 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
HPS1Q92902 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HPS1Q92902 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HPS1Q92902 AC096631.2-201ENST00000436136 790 ntBASIC19.33■□□□□ 0.68
HPS1Q92902 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.33■□□□□ 0.68
HPS1Q92902 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.33■□□□□ 0.68
HPS1Q92902 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HPS1Q92902 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HPS1Q92902 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HPS1Q92902 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.32■□□□□ 0.68
HPS1Q92902 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HPS1Q92902 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS1Q92902 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS1Q92902 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS1Q92902 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS1Q92902 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HPS1Q92902 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.32■□□□□ 0.68
HPS1Q92902 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS1Q92902 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS1Q92902 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS1Q92902 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS1Q92902 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS1Q92902 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
HPS1Q92902 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HPS1Q92902 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.31■□□□□ 0.68
HPS1Q92902 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HPS1Q92902 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS1Q92902 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HPS1Q92902 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS1Q92902 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms