Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CROCCP3Q8IVE0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CROCCP3Q8IVE0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CROCCP3Q8IVE0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CROCCP3Q8IVE0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CROCCP3Q8IVE0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CROCCP3Q8IVE0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CROCCP3Q8IVE0 SMG8-203ENST00000578922 2178 ntBASIC19.38■□□□□ 0.69
CROCCP3Q8IVE0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.38■□□□□ 0.69
CROCCP3Q8IVE0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CROCCP3Q8IVE0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CROCCP3Q8IVE0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.38■□□□□ 0.69
CROCCP3Q8IVE0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CROCCP3Q8IVE0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CROCCP3Q8IVE0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CROCCP3Q8IVE0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CROCCP3Q8IVE0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CROCCP3Q8IVE0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CROCCP3Q8IVE0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CROCCP3Q8IVE0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CROCCP3Q8IVE0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.37■□□□□ 0.69
CROCCP3Q8IVE0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.37■□□□□ 0.69
CROCCP3Q8IVE0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
CROCCP3Q8IVE0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.37■□□□□ 0.69
CROCCP3Q8IVE0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CROCCP3Q8IVE0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CROCCP3Q8IVE0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 AFG3L1P-217ENST00000557444 2447 ntBASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 AL353803.4-201ENST00000565882 1934 ntBASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CROCCP3Q8IVE0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CROCCP3Q8IVE0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CROCCP3Q8IVE0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CROCCP3Q8IVE0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CROCCP3Q8IVE0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CROCCP3Q8IVE0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CROCCP3Q8IVE0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.35■□□□□ 0.69
CROCCP3Q8IVE0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CROCCP3Q8IVE0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CROCCP3Q8IVE0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CROCCP3Q8IVE0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CROCCP3Q8IVE0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CROCCP3Q8IVE0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CROCCP3Q8IVE0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CROCCP3Q8IVE0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CROCCP3Q8IVE0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CROCCP3Q8IVE0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CROCCP3Q8IVE0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CROCCP3Q8IVE0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CROCCP3Q8IVE0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CROCCP3Q8IVE0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CROCCP3Q8IVE0 AC022413.1-201ENST00000624602 984 ntBASIC19.34■□□□□ 0.69
CROCCP3Q8IVE0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CROCCP3Q8IVE0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.34■□□□□ 0.69
CROCCP3Q8IVE0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CROCCP3Q8IVE0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CROCCP3Q8IVE0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.34■□□□□ 0.69
CROCCP3Q8IVE0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CROCCP3Q8IVE0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CROCCP3Q8IVE0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.34■□□□□ 0.69
CROCCP3Q8IVE0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CROCCP3Q8IVE0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CROCCP3Q8IVE0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.33■□□□□ 0.69
CROCCP3Q8IVE0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.33■□□□□ 0.69
CROCCP3Q8IVE0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CROCCP3Q8IVE0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CROCCP3Q8IVE0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CROCCP3Q8IVE0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CROCCP3Q8IVE0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CROCCP3Q8IVE0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.33■□□□□ 0.69
CROCCP3Q8IVE0 RPS2P35-201ENST00000443417 897 ntBASIC19.33■□□□□ 0.68
CROCCP3Q8IVE0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.33■□□□□ 0.68
CROCCP3Q8IVE0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.33■□□□□ 0.68
CROCCP3Q8IVE0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CROCCP3Q8IVE0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CROCCP3Q8IVE0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CROCCP3Q8IVE0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CROCCP3Q8IVE0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CROCCP3Q8IVE0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CROCCP3Q8IVE0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CROCCP3Q8IVE0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CROCCP3Q8IVE0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CROCCP3Q8IVE0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CROCCP3Q8IVE0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms