Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.326e-7■■□□□ 14.1
PABPN1Q86U42 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC28.81■■■□□ 2.26e-8■■□□□ 14.1
PABPN1Q86U42 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC27.99■■■□□ 2.076e-8■■□□□ 14.1
PABPN1Q86U42 OBSL1-208ENST00000465149 5380 ntTSL 227.68■■■□□ 2.026e-8■■□□□ 14.1
PABPN1Q86U42 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.836e-8■■□□□ 14.1
PABPN1Q86U42 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC26.44■■□□□ 1.826e-8■■□□□ 14.1
PABPN1Q86U42 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC23.02■■□□□ 1.286e-8■■□□□ 14.1
PABPN1Q86U42 MTA1-211ENST00000481206 842 ntTSL 240.86■■■■■ 4.131e-9■■□□□ 14.1
PABPN1Q86U42 MTA1-212ENST00000481635 700 ntTSL 233.44■■■□□ 2.941e-9■■□□□ 14.1
PABPN1Q86U42 MTA1-215ENST00000494981 509 ntTSL 330.13■■■□□ 2.411e-9■■□□□ 14.1
PABPN1Q86U42 MTA1-205ENST00000426567 568 ntTSL 329.44■■■□□ 2.31e-9■■□□□ 14.1
PABPN1Q86U42 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC45.86■■■■■ 4.931e-7■■□□□ 14.1
PABPN1Q86U42 HMG20B-216ENST00000585900 741 ntTSL 337.09■■■■□ 3.531e-7■■□□□ 14.1
PABPN1Q86U42 EDC4-214ENST00000577105 580 ntTSL 332.3■■■□□ 2.769e-10■■□□□ 14.1
PABPN1Q86U42 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.522e-6■■□□□ 14.1
PABPN1Q86U42 ABCG5-203ENST00000409962 2512 ntTSL 230.61■■■□□ 2.493e-7■■□□□ 14.1
PABPN1Q86U42 HMG20B-213ENST00000488973 2434 ntTSL 1 (best)30.25■■■□□ 2.431e-7■■□□□ 14.1
PABPN1Q86U42 EDC4-204ENST00000572221 5267 ntTSL 229.57■■■□□ 2.329e-10■■□□□ 14.1
PABPN1Q86U42 EDC4-210ENST00000575507 570 ntTSL 228.92■■■□□ 2.229e-10■■□□□ 14.1
PABPN1Q86U42 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC27.54■■■□□ 23e-7■■□□□ 14.1
PABPN1Q86U42 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.949e-10■■□□□ 14.1
PABPN1Q86U42 EDC4-209ENST00000575033 530 ntTSL 326.51■■□□□ 1.839e-10■■□□□ 14.1
PABPN1Q86U42 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.783e-7■■□□□ 14.1
PABPN1Q86U42 ABCG5-204ENST00000486512 3033 ntTSL 1 (best)24.78■■□□□ 1.563e-7■■□□□ 14.1
PABPN1Q86U42 EDC4-206ENST00000573985 482 ntTSL 319.21■□□□□ 0.679e-10■■□□□ 14.1
PABPN1Q86U42 EDC4-207ENST00000573992 3934 ntTSL 1 (best)15.78■□□□□ 0.129e-10■■□□□ 14.1
PABPN1Q86U42 AC040162.3-201ENST00000572067 3907 ntBASIC15.48■□□□□ 0.079e-10■■□□□ 14.1
PABPN1Q86U42 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC36.17■■■■□ 3.381e-7■■□□□ 14.1
PABPN1Q86U42 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC30.29■■■□□ 2.448e-7■■□□□ 14.1
PABPN1Q86U42 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.968e-7■■□□□ 14.1
PABPN1Q86U42 LUC7L-205ENST00000418978 989 ntTSL 524.9■■□□□ 1.585e-8■■□□□ 14.1
PABPN1Q86U42 PUF60-205ENST00000524570 1934 ntTSL 229.12■■■□□ 2.251e-7■■□□□ 14.1
PABPN1Q86U42 PUF60-220ENST00000532884 819 ntTSL 528.8■■■□□ 2.21e-7■■□□□ 14.1
PABPN1Q86U42 NASP-205ENST00000437901 874 ntTSL 523.12■■□□□ 1.291e-6■■□□□ 14
PABPN1Q86U42 NASP-212ENST00000527359 743 ntTSL 322.71■■□□□ 1.231e-6■■□□□ 14
PABPN1Q86U42 NASP-204ENST00000437362 999 ntTSL 222.56■■□□□ 1.21e-6■■□□□ 14
PABPN1Q86U42 NASP-216ENST00000528238 894 ntAPPRIS ALT2 TSL 520.35■□□□□ 0.851e-6■■□□□ 14
PABPN1Q86U42 NASP-206ENST00000453748 2080 ntTSL 216.49■□□□□ 0.231e-6■■□□□ 14
PABPN1Q86U42 CDK16-214ENST00000520141 498 ntTSL 327.33■■□□□ 1.972e-11■■□□□ 14
PABPN1Q86U42 CDK16-206ENST00000462827 664 ntTSL 522.82■■□□□ 1.242e-11■■□□□ 14
PABPN1Q86U42 CDK16-205ENST00000462483 527 ntTSL 216.31■□□□□ 0.22e-11■■□□□ 14
PABPN1Q86U42 TKFC-221ENST00000534370 360 ntTSL 221.49■■□□□ 1.038e-7■■□□□ 14
PABPN1Q86U42 NADSYN1-219ENST00000531236 3429 ntTSL 216.94■□□□□ 0.33e-7■■□□□ 14
PABPN1Q86U42 CAPN12-203ENST00000594497 526 ntTSL 333.61■■■□□ 2.974e-10■■□□□ 14
PABPN1Q86U42 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC32.94■■■□□ 2.862e-6■■□□□ 14
PABPN1Q86U42 SNRNP200-202ENST00000429650 2637 ntTSL 220.73■□□□□ 0.917e-7■■□□□ 14
PABPN1Q86U42 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC23.29■■□□□ 1.321e-6■■□□□ 14
PABPN1Q86U42 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC19.67■□□□□ 0.741e-6■■□□□ 14
PABPN1Q86U42 LPCAT1-202ENST00000475622 5610 ntTSL 524.46■■□□□ 1.516e-9■■□□□ 14
PABPN1Q86U42 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.016e-9■■□□□ 14
PABPN1Q86U42 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.284e-7■■□□□ 14
PABPN1Q86U42 EEF1D-232ENST00000530445 1217 ntTSL 230.4■■■□□ 2.462e-7■■□□□ 14
PABPN1Q86U42 EEF1D-248ENST00000533494 758 ntTSL 526.45■■□□□ 1.822e-7■■□□□ 14
PABPN1Q86U42 EEF1D-226ENST00000529516 473 ntTSL 320.13■□□□□ 0.812e-7■■□□□ 14
PABPN1Q86U42 PPP6R2-205ENST00000401672 2199 ntTSL 222.95■■□□□ 1.267e-7■■□□□ 14
PABPN1Q86U42 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.157e-7■■□□□ 14
PABPN1Q86U42 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.077e-7■■□□□ 14
PABPN1Q86U42 PPP6R2-201ENST00000216061 3415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.667e-7■■□□□ 14
PABPN1Q86U42 AKT1-219ENST00000610370 3187 ntTSL 221.73■■□□□ 1.071e-6■■□□□ 14
PABPN1Q86U42 GSDMB-215ENST00000524039 1100 ntTSL 217.41■□□□□ 0.386e-8■■□□□ 14
PABPN1Q86U42 GSDMB-213ENST00000522564 958 ntTSL 215.8■□□□□ 0.126e-8■■□□□ 14
PABPN1Q86U42 GSDMB-214ENST00000523371 1127 ntTSL 213.48□□□□□ -0.256e-8■■□□□ 14
PABPN1Q86U42 SORBS3-215ENST00000522721 601 ntTSL 447.19■■■■■ 5.142e-8■■□□□ 14
PABPN1Q86U42 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC38.85■■■■□ 3.812e-6■■□□□ 14
PABPN1Q86U42 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC36.18■■■■□ 3.382e-6■■□□□ 14
PABPN1Q86U42 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC33.97■■■■□ 3.032e-6■■□□□ 14
PABPN1Q86U42 EIF2B4-202ENST00000405940 1570 ntTSL 1 (best)32.73■■■□□ 2.832e-6■■□□□ 14
PABPN1Q86U42 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC29.99■■■□□ 2.392e-6■■□□□ 14
PABPN1Q86U42 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC29.16■■■□□ 2.262e-6■■□□□ 14
PABPN1Q86U42 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC27.16■■□□□ 1.942e-6■■□□□ 14
PABPN1Q86U42 BAX-207ENST00000502487 1346 ntTSL 1 (best)52.78■■■■■ 6.049e-7■■□□□ 14
PABPN1Q86U42 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC50.2■■■■■ 5.639e-7■■□□□ 14
PABPN1Q86U42 BAX-211ENST00000513545 775 ntTSL 344.65■■■■■ 4.749e-7■■□□□ 14
PABPN1Q86U42 BAX-205ENST00000391871 687 ntTSL 5 BASIC27.11■■□□□ 1.939e-7■■□□□ 14
PABPN1Q86U42 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC26.43■■□□□ 1.829e-7■■□□□ 14
PABPN1Q86U42 CS-214ENST00000548849 1028 ntTSL 335.93■■■■□ 3.342e-8■■□□□ 14
PABPN1Q86U42 TMEM259-208ENST00000592052 1637 nt47.17■■■■■ 5.141e-9■■□□□ 14
PABPN1Q86U42 TMEM259-210ENST00000592618 1877 ntTSL 542.83■■■■■ 4.451e-9■■□□□ 14
PABPN1Q86U42 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC35.75■■■■□ 3.311e-9■■□□□ 14
PABPN1Q86U42 TMEM259-211ENST00000593068 1965 ntTSL 531.67■■■□□ 2.661e-9■■□□□ 14
PABPN1Q86U42 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.451e-9■■□□□ 14
PABPN1Q86U42 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC30.1■■■□□ 2.411e-9■■□□□ 14
PABPN1Q86U42 TMEM259-205ENST00000586704 2538 ntTSL 529.51■■■□□ 2.311e-9■■□□□ 14
PABPN1Q86U42 PPP6R1-204ENST00000587457 2389 ntTSL 225.82■■□□□ 1.724e-7■■□□□ 14
PABPN1Q86U42 PROC-203ENST00000409048 1586 ntTSL 5 BASIC44.29■■■■■ 4.685e-9■■□□□ 14
PABPN1Q86U42 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.55e-9■■□□□ 14
PABPN1Q86U42 ZNF444-210ENST00000592171 688 ntTSL 345.8■■■■■ 4.923e-6■■□□□ 14
PABPN1Q86U42 ZNF444-206ENST00000587664 568 ntTSL 337.53■■■■□ 3.63e-6■■□□□ 14
PABPN1Q86U42 CS-202ENST00000542324 1893 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.033e-7■■□□□ 13.9
PABPN1Q86U42 CS-204ENST00000546621 1513 ntTSL 213.17□□□□□ -0.33e-7■■□□□ 13.9
PABPN1Q86U42 ATP13A1-205ENST00000469641 4241 ntTSL 216.7■□□□□ 0.264e-7■■□□□ 13.9
PABPN1Q86U42 DDX56-210ENST00000479440 599 ntTSL 234.71■■■■□ 3.151e-6■■□□□ 13.9
PABPN1Q86U42 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.082e-7■■□□□ 13.9
PABPN1Q86U42 WSB1-204ENST00000467843 4187 ntTSL 1 (best)13.71□□□□□ -0.222e-7■■□□□ 13.9
PABPN1Q86U42 MAPK8IP3-204ENST00000561949 489 ntTSL 237.94■■■■□ 3.663e-9■■□□□ 13.9
PABPN1Q86U42 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.348e-10■■□□□ 13.9
PABPN1Q86U42 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.088e-10■■□□□ 13.9
PABPN1Q86U42 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.158e-10■■□□□ 13.9
PABPN1Q86U42 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.248e-10■■□□□ 13.9
PABPN1Q86U42 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.78e-10■■□□□ 13.9
Retrieved 100 of 8,254 protein–RNA pairs in 129.8 ms