RNA–Protein interactions for RNA: ENST00000462483.1

CDK16-205, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-205ENST00000462483 AEBP2Q6ZN18 517 aaPredicted RBP27.37■■□□□ 1.97
CDK16-205ENST00000462483 CHIC1Q5VXU3 224 aa26.17■■□□□ 1.78
CDK16-205ENST00000462483 SENP3Q9H4L4 574 aaPredicted RBP23.25■■□□□ 1.31
CDK16-205ENST00000462483 PHF23Q9BUL5 403 aaPredicted RBP23.03■■□□□ 1.28
CDK16-205ENST00000462483 FOXD1Q16676 465 aa21.69■■□□□ 1.06
CDK16-205ENST00000462483 PLPPR3Q6T4P5 718 aa21.01■□□□□ 0.95
CDK16-205ENST00000462483 PPP6R1Q9UPN7 881 aa20.49■□□□□ 0.87
CDK16-205ENST00000462483 ADRA2BP18089 450 aa20.46■□□□□ 0.87
CDK16-205ENST00000462483 PIAS4Q8N2W9 510 aaPredicted RBP20.36■□□□□ 0.85
CDK16-205ENST00000462483 NISCHQ9Y2I1 1504 aa20.19■□□□□ 0.82
CDK16-205ENST00000462483 MSH5O43196 834 aa20.15■□□□□ 0.82
CDK16-205ENST00000462483 POTEDQ86YR6 584 aa19.34■□□□□ 0.69
CDK16-205ENST00000462483 MAPK8IP2Q13387 824 aaPredicted RBP18.74■□□□□ 0.59
CDK16-205ENST00000462483 SCAF1Q9H7N4 1312 aaKnown RBP18.62■□□□□ 0.57
CDK16-205ENST00000462483 PPP4R3CPQ6ZMV5 832 aa18.49■□□□□ 0.55
CDK16-205ENST00000462483 DMRT2Q9Y5R5 561 aa18.47■□□□□ 0.55
CDK16-205ENST00000462483 CCDC180Q9P1Z9 1646 aa18.08■□□□□ 0.48
CDK16-205ENST00000462483 CNKSR2Q8WXI2 1034 aa18.04■□□□□ 0.48
CDK16-205ENST00000462483 DCAF8L1A6NGE4 600 aa17.86■□□□□ 0.45
CDK16-205ENST00000462483 HOXD11P31277 338 aaPredicted RBP17.86■□□□□ 0.45
CDK16-205ENST00000462483 NCBP3Q53F19 620 aaKnown RBP17.8■□□□□ 0.44
CDK16-205ENST00000462483 RNF216Q9NWF9 866 aaPredicted RBP17.8■□□□□ 0.44
CDK16-205ENST00000462483 NPM3O75607 178 aaKnown RBP17.58■□□□□ 0.4
CDK16-205ENST00000462483 ABCC9O60706 1549 aa17.55■□□□□ 0.4
CDK16-205ENST00000462483 KCNA4P22459 653 aa17.5■□□□□ 0.39
CDK16-205ENST00000462483 CACNB1Q02641 598 aaPredicted RBP17.25■□□□□ 0.35
CDK16-205ENST00000462483 RNF39Q9H2S5 420 aa17.23■□□□□ 0.35
CDK16-205ENST00000462483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDK16-205ENST00000462483 DNAJC5BQ9UF47 199 aa17.08■□□□□ 0.32
CDK16-205ENST00000462483 C1QBPQ07021 282 aaKnown RBP16.96■□□□□ 0.31
CDK16-205ENST00000462483 RB1CC1Q8TDY2 1594 aa16.91■□□□□ 0.3
CDK16-205ENST00000462483 NACADO15069 1562 aa16.85■□□□□ 0.29
CDK16-205ENST00000462483 ZCCHC6Q5VYS8 1495 aaKnown RBP16.85■□□□□ 0.29
CDK16-205ENST00000462483 UNC13AQ9UPW8 1703 aa16.79■□□□□ 0.28
CDK16-205ENST00000462483 DCAF8L2P0C7V8 631 aa16.78■□□□□ 0.28
CDK16-205ENST00000462483 U3KPZ7 1027 aaPredicted RBP16.75■□□□□ 0.27
CDK16-205ENST00000462483 SLC4A2P04920 1241 aa16.73■□□□□ 0.27
CDK16-205ENST00000462483 MYO15BQ96JP2 1530 aa16.69■□□□□ 0.26
CDK16-205ENST00000462483 DCAF1Q9Y4B6 1507 aa16.67■□□□□ 0.26
CDK16-205ENST00000462483 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
CDK16-205ENST00000462483 SCRIBQ14160 1630 aa16.52■□□□□ 0.23
CDK16-205ENST00000462483 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
CDK16-205ENST00000462483 CAPN15O75808 1086 aa16.46■□□□□ 0.23
CDK16-205ENST00000462483 BICRAQ9NZM4 1560 aa16.43■□□□□ 0.22
CDK16-205ENST00000462483 PABPN1Q86U42 306 aaKnown RBP eCLIP16.31■□□□□ 0.22e-11■■□□□ 14
CDK16-205ENST00000462483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.28■□□□□ 0.2
CDK16-205ENST00000462483 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
CDK16-205ENST00000462483 HNRNPUL2Q1KMD3 747 aaKnown RBP16.28■□□□□ 0.2
CDK16-205ENST00000462483 APLP2Q06481 763 aa16.24■□□□□ 0.19
CDK16-205ENST00000462483 MYCNP04198 464 aaPredicted RBP16.23■□□□□ 0.19
CDK16-205ENST00000462483 DSG3P32926 999 aa16.23■□□□□ 0.19
CDK16-205ENST00000462483 SAMD1Q6SPF0 538 aaPredicted RBP16.23■□□□□ 0.19
CDK16-205ENST00000462483 FOXD4L1Q9NU39 408 aa16.21■□□□□ 0.19
CDK16-205ENST00000462483 ZNF219Q9P2Y4 722 aaPredicted RBP16.15■□□□□ 0.18
CDK16-205ENST00000462483 ABCB7O75027 752 aa16.14■□□□□ 0.17
CDK16-205ENST00000462483 SHROOM4Q9ULL8 1493 aa16.12■□□□□ 0.17
CDK16-205ENST00000462483 ZBTB22O15209 634 aa16.09■□□□□ 0.17
CDK16-205ENST00000462483 EIF4G1Q04637 1599 aaKnown RBP15.97■□□□□ 0.15
CDK16-205ENST00000462483 CC2D2AQ9P2K1 1620 aa15.94■□□□□ 0.14
CDK16-205ENST00000462483 ATF5Q9Y2D1 282 aaPredicted RBP15.92■□□□□ 0.14
CDK16-205ENST00000462483 POLA2Q14181 598 aa15.84■□□□□ 0.13
CDK16-205ENST00000462483 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
CDK16-205ENST00000462483 CECR2Q9BXF3 1484 aa15.74■□□□□ 0.11
CDK16-205ENST00000462483 BAZ1AQ9NRL2 1556 aaPredicted RBP15.67■□□□□ 0.1
CDK16-205ENST00000462483 ATXN8OSP0DMR3 200 aa15.6■□□□□ 0.09
CDK16-205ENST00000462483 MROH2BQ7Z745 1585 aa15.6■□□□□ 0.09
CDK16-205ENST00000462483 EHMT2Q96KQ7 1210 aa15.57■□□□□ 0.08
CDK16-205ENST00000462483 SMARCA2P51531 1590 aa15.56■□□□□ 0.08
CDK16-205ENST00000462483 WIZO95785 1651 aa15.54■□□□□ 0.08
CDK16-205ENST00000462483 CSRNP3Q8WYN3 585 aa15.54■□□□□ 0.08
CDK16-205ENST00000462483 ATAD2BQ9ULI0 1458 aa15.53■□□□□ 0.08
CDK16-205ENST00000462483 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
CDK16-205ENST00000462483 HMGXB3Q12766 1538 aa15.5■□□□□ 0.07
CDK16-205ENST00000462483 NCAPD3P42695 1498 aa15.46■□□□□ 0.07
CDK16-205ENST00000462483 RBM42Q9BTD8 480 aaKnown RBP15.45■□□□□ 0.06
CDK16-205ENST00000462483 ZBTB12Q9Y330 459 aaPredicted RBP15.45■□□□□ 0.06
CDK16-205ENST00000462483 BAZ1BQ9UIG0 1483 aaKnown RBP15.45■□□□□ 0.06
CDK16-205ENST00000462483 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
CDK16-205ENST00000462483 RSF1Q96T23 1441 aaPredicted RBP15.34■□□□□ 0.05
CDK16-205ENST00000462483 TOP2AP11388 1531 aaKnown RBP15.29■□□□□ 0.04
CDK16-205ENST00000462483 FBLN2P98095 1184 aa15.23■□□□□ 0.03
CDK16-205ENST00000462483 NESP48681 1621 aa15.21■□□□□ 0.03
CDK16-205ENST00000462483 POTEHQ6S545 545 aa15.21■□□□□ 0.03
CDK16-205ENST00000462483 KIF21AQ7Z4S6 1674 aa15.21■□□□□ 0.03
CDK16-205ENST00000462483 PRDM2Q13029 1718 aa15.2■□□□□ 0.02
CDK16-205ENST00000462483 LAMC3Q9Y6N6 1575 aa15.17■□□□□ 0.02
CDK16-205ENST00000462483 MKRN4PQ13434 485 aaPredicted RBP15.16■□□□□ 0.02
CDK16-205ENST00000462483 AKT1S1Q96B36 256 aa15.15■□□□□ 0.02
CDK16-205ENST00000462483 ERCC6Q03468 1493 aa15.1■□□□□ 0.01
CDK16-205ENST00000462483 CHRDL2Q6WN34 429 aa15.08■□□□□ 0
CDK16-205ENST00000462483 THOC2Q8NI27 1593 aaKnown RBP15.06■□□□□ 0
CDK16-205ENST00000462483 REM2Q8IYK8 340 aaPredicted RBP15.05■□□□□ -0
CDK16-205ENST00000462483 CCDC88BA6NC98 1476 aa15.05■□□□□ -0
CDK16-205ENST00000462483 SPDYE2BA6NHP3 402 aa15.01□□□□□ -0.01
CDK16-205ENST00000462483 SPDYE6P0CI01 402 aa15.01□□□□□ -0.01
CDK16-205ENST00000462483 SPDYE2Q495Y8 402 aa15.01□□□□□ -0.01
CDK16-205ENST00000462483 CADPSQ9ULU8 1353 aa15□□□□□ -0.01
CDK16-205ENST00000462483 SUPT5HO00267 1087 aaKnown RBP15□□□□□ -0.01
CDK16-205ENST00000462483 CFTRP13569 1480 aa14.96□□□□□ -0.01
CDK16-205ENST00000462483 PDS5BQ9NTI5 1447 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms