Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.057e-8■■■■□ 20.5
LARP4Q71RC2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.693e-7■■■■□ 20.5
LARP4Q71RC2 EMC7-202ENST00000527822 581 ntTSL 216.52■□□□□ 0.243e-7■■■■□ 20.5
LARP4Q71RC2 EMC7-203ENST00000528949 506 ntTSL 34.09□□□□□ -1.753e-7■■■■□ 20.5
LARP4Q71RC2 ERF-206ENST00000596818 566 ntTSL 314.42□□□□□ -0.13e-6■■■■□ 20.5
LARP4Q71RC2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.141e-7■■■■□ 20.5
LARP4Q71RC2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.32■□□□□ 0.046e-7■■■■□ 20.5
LARP4Q71RC2 ARHGDIA-215ENST00000583868 815 ntTSL 312.37□□□□□ -0.436e-7■■■■□ 20.5
LARP4Q71RC2 UQCRH-201ENST00000311672 604 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.699e-10■■■■□ 20.5
LARP4Q71RC2 UQCRH-202ENST00000460947 621 ntTSL 28.25□□□□□ -1.099e-10■■■■□ 20.5
LARP4Q71RC2 UQCRH-205ENST00000496387 674 ntTSL 1 (best)5.48□□□□□ -1.539e-10■■■■□ 20.5
LARP4Q71RC2 UQCRH-204ENST00000489056 553 ntTSL 24.12□□□□□ -1.759e-10■■■■□ 20.5
LARP4Q71RC2 ATP5J2-PTCD1-202ENST00000437572 544 ntTSL 415.51■□□□□ 0.074e-8■■■■□ 20.5
LARP4Q71RC2 ATP5J2-PTCD1-203ENST00000451138 331 ntTSL 414.95□□□□□ -0.024e-8■■■■□ 20.5
LARP4Q71RC2 PTCD1-204ENST00000430982 571 ntTSL 413.94□□□□□ -0.184e-8■■■■□ 20.5
LARP4Q71RC2 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.184e-8■■■■□ 20.5
LARP4Q71RC2 ATP5J2-206ENST00000466753 774 ntTSL 212.46□□□□□ -0.414e-8■■■■□ 20.5
LARP4Q71RC2 ATP5J2-204ENST00000414062 541 ntTSL 49.31□□□□□ -0.924e-8■■■■□ 20.5
LARP4Q71RC2 ATP5J2-202ENST00000359832 323 ntTSL 2 BASIC8.58□□□□□ -1.044e-8■■■■□ 20.5
LARP4Q71RC2 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.62□□□□□ -1.354e-8■■■■□ 20.5
LARP4Q71RC2 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.06□□□□□ -1.444e-8■■■■□ 20.5
LARP4Q71RC2 ATP5J2-210ENST00000491560 658 ntTSL 24.84□□□□□ -1.634e-8■■■■□ 20.5
LARP4Q71RC2 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.03□□□□□ -1.764e-8■■■■□ 20.5
LARP4Q71RC2 DRAP1-203ENST00000525190 474 nt20.31■□□□□ 0.844e-8■■■■□ 20.5
LARP4Q71RC2 HYOU1-215ENST00000543287 2464 ntTSL 217.31■□□□□ 0.361e-7■■■■□ 20.5
LARP4Q71RC2 HYOU1-208ENST00000531682 319 ntTSL 211.37□□□□□ -0.591e-7■■■■□ 20.5
LARP4Q71RC2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.42■□□□□ 0.546e-10■■■■□ 20.5
LARP4Q71RC2 TPI1-204ENST00000474253 427 ntTSL 1 (best)10.35□□□□□ -0.754e-7■■■■□ 20.5
LARP4Q71RC2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.88■□□□□ 0.452e-6■■■■□ 20.4
LARP4Q71RC2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.352e-6■■■■□ 20.4
LARP4Q71RC2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.312e-6■■■■□ 20.4
LARP4Q71RC2 EHMT1-250ENST00000637977 2167 ntTSL 515.69■□□□□ 0.12e-6■■■■□ 20.4
LARP4Q71RC2 EHMT1-219ENST00000626066 1297 ntTSL 515.44■□□□□ 0.062e-6■■■■□ 20.4
LARP4Q71RC2 EHMT1-201ENST00000371394 2679 ntTSL 214.08□□□□□ -0.162e-6■■■■□ 20.4
LARP4Q71RC2 EHMT1-251ENST00000638071 1710 ntTSL 513.22□□□□□ -0.292e-6■■■■□ 20.4
LARP4Q71RC2 EHMT1-228ENST00000636027 3114 ntTSL 511.92□□□□□ -0.52e-6■■■■□ 20.4
LARP4Q71RC2 EHMT1-221ENST00000629335 3600 ntTSL 5 BASIC11.43□□□□□ -0.582e-6■■■■□ 20.4
LARP4Q71RC2 EHMT1-237ENST00000637261 4208 ntTSL 59.93□□□□□ -0.822e-6■■■■□ 20.4
LARP4Q71RC2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.982e-7■■■■□ 20.4
LARP4Q71RC2 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.62□□□□□ -0.392e-7■■■■□ 20.4
LARP4Q71RC2 RPL31-201ENST00000264258 1865 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.752e-7■■■■□ 20.4
LARP4Q71RC2 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC8.07□□□□□ -1.122e-7■■■■□ 20.4
LARP4Q71RC2 RPL31-210ENST00000441435 717 ntTSL 26.91□□□□□ -1.32e-7■■■■□ 20.4
LARP4Q71RC2 RPL31-204ENST00000409038 817 ntTSL 2 BASIC6.1□□□□□ -1.432e-7■■■■□ 20.4
LARP4Q71RC2 RPL31-211ENST00000456292 357 ntTSL 25.84□□□□□ -1.472e-7■■■■□ 20.4
LARP4Q71RC2 RPL31-209ENST00000419276 781 ntTSL 55.84□□□□□ -1.472e-7■■■■□ 20.4
LARP4Q71RC2 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.482e-7■■■■□ 20.4
LARP4Q71RC2 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.732e-7■■■■□ 20.4
LARP4Q71RC2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.071e-7■■■■□ 20.4
LARP4Q71RC2 GMNN-207ENST00000620958 1039 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.61e-7■■■■□ 20.4
LARP4Q71RC2 GMNN-202ENST00000356509 1133 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.641e-7■■■■□ 20.4
LARP4Q71RC2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.672e-6■■■■□ 20.3
LARP4Q71RC2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.042e-6■■■■□ 20.3
LARP4Q71RC2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.012e-6■■■■□ 20.3
LARP4Q71RC2 AC099811.2-202ENST00000592248 694 ntTSL 310.16□□□□□ -0.782e-6■■■■□ 20.3
LARP4Q71RC2 AC099811.2-201ENST00000585562 646 ntTSL 37.92□□□□□ -1.142e-6■■■■□ 20.3
LARP4Q71RC2 GANAB-216ENST00000540933 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.598e-9■■■■□ 20.3
LARP4Q71RC2 GANAB-201ENST00000346178 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.798e-9■■■■□ 20.3
LARP4Q71RC2 GANAB-211ENST00000532402 3718 ntTSL 1 (best)9.09□□□□□ -0.958e-9■■■■□ 20.3
LARP4Q71RC2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.79□□□□□ -0.25e-6■■■■□ 20.3
LARP4Q71RC2 AC134978.1-201ENST00000579480 788 ntTSL 3 BASIC9.56□□□□□ -0.885e-6■■■■□ 20.3
LARP4Q71RC2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.31■■□□□ 13e-6■■■■□ 20.3
LARP4Q71RC2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.09■□□□□ 0.813e-6■■■■□ 20.3
LARP4Q71RC2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.233e-6■■■■□ 20.3
LARP4Q71RC2 ORMDL3-203ENST00000579287 349 ntTSL 310.88□□□□□ -0.673e-12■■■■□ 20.3
LARP4Q71RC2 RHOC-213ENST00000473074 943 ntTSL 513.3□□□□□ -0.282e-7■■■■□ 20.3
LARP4Q71RC2 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.342e-7■■■■□ 20.3
LARP4Q71RC2 RHOC-205ENST00000369636 786 ntTSL 2 BASIC12.49□□□□□ -0.412e-7■■■■□ 20.3
LARP4Q71RC2 H2AFJ-201ENST00000389078 785 ntTSL 317.76■□□□□ 0.432e-7■■■■□ 20.3
LARP4Q71RC2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.08■□□□□ 0.162e-7■■■■□ 20.3
LARP4Q71RC2 H2AFJ-202ENST00000501744 3107 ntTSL 1 (best)7□□□□□ -1.292e-7■■■■□ 20.3
LARP4Q71RC2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.084e-9■■■■□ 20.2
LARP4Q71RC2 C7orf50-204ENST00000412051 1147 ntAPPRIS ALT2 TSL 219.16■□□□□ 0.664e-9■■■■□ 20.2
LARP4Q71RC2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.484e-9■■■■□ 20.2
LARP4Q71RC2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.474e-9■■■■□ 20.2
LARP4Q71RC2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.162e-6■■■■□ 20.2
LARP4Q71RC2 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC12.71□□□□□ -0.372e-6■■■■□ 20.2
LARP4Q71RC2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.981e-9■■■■□ 20.2
LARP4Q71RC2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.81■□□□□ 0.921e-9■■■■□ 20.2
LARP4Q71RC2 PMPCA-204ENST00000444897 2316 ntTSL 216.4■□□□□ 0.221e-9■■■■□ 20.2
LARP4Q71RC2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.62■□□□□ 0.096e-10■■■■□ 20.2
LARP4Q71RC2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.93□□□□□ -0.024e-6■■■■□ 20.2
LARP4Q71RC2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.024e-6■■■■□ 20.2
LARP4Q71RC2 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.82□□□□□ -0.044e-6■■■■□ 20.2
LARP4Q71RC2 TYMSOS-202ENST00000585033 560 ntTSL 217.97■□□□□ 0.476e-7■■■■□ 20.2
LARP4Q71RC2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.6■□□□□ 0.256e-7■■■■□ 20.2
LARP4Q71RC2 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.132e-6■■■■□ 20.2
LARP4Q71RC2 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.172e-6■■■■□ 20.2
LARP4Q71RC2 ANGPTL8-202ENST00000587543 432 ntTSL 1 (best)12.88□□□□□ -0.352e-6■■■■□ 20.2
LARP4Q71RC2 LINC02327-206ENST00000551588 885 ntTSL 5 BASIC8.16□□□□□ -1.19e-7■■■■□ 20.1
LARP4Q71RC2 PMM1-203ENST00000463617 2538 ntTSL 214.52□□□□□ -0.094e-7■■■■□ 20.1
LARP4Q71RC2 PMM1-205ENST00000472620 1576 ntTSL 514.09□□□□□ -0.154e-7■■■■□ 20.1
LARP4Q71RC2 PMM1-208ENST00000485648 1405 ntTSL 513.57□□□□□ -0.244e-7■■■■□ 20.1
LARP4Q71RC2 PMM1-207ENST00000482178 2020 ntTSL 212.83□□□□□ -0.364e-7■■■■□ 20.1
LARP4Q71RC2 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.484e-7■■■■□ 20.1
LARP4Q71RC2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.036e-8■■■■□ 20.1
LARP4Q71RC2 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.256e-8■■■■□ 20.1
LARP4Q71RC2 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC12.8□□□□□ -0.366e-8■■■■□ 20.1
LARP4Q71RC2 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.47□□□□□ -1.691e-6■■■■□ 20.1
LARP4Q71RC2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.475e-11■■■■□ 20.1
Retrieved 100 of 15,922 protein–RNA pairs in 166.1 ms