RNA–Protein interactions for RNA: ENST00000463617.5

PMM1-203, Transcript of phosphomannomutase 1, humanhuman

TSL 2

Gene PMM1, Length 2,538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM1-203ENST00000463617 NISCHQ9Y2I1 1504 aa30.57■■■□□ 2.48
PMM1-203ENST00000463617 SHROOM4Q9ULL8 1493 aa26.18■■□□□ 1.78
PMM1-203ENST00000463617 CCDC180Q9P1Z9 1646 aa25.91■■□□□ 1.74
PMM1-203ENST00000463617 ZCCHC6Q5VYS8 1495 aaKnown RBP25.82■■□□□ 1.72
PMM1-203ENST00000463617 SUPT5HO00267 1087 aaKnown RBP25.56■■□□□ 1.68
PMM1-203ENST00000463617 DCAF8L2P0C7V8 631 aa25.55■■□□□ 1.68
PMM1-203ENST00000463617 DCAF1Q9Y4B6 1507 aa24.95■■□□□ 1.59
PMM1-203ENST00000463617 CHIC1Q5VXU3 224 aa24.75■■□□□ 1.55
PMM1-203ENST00000463617 MYO15BQ96JP2 1530 aa24.71■■□□□ 1.55
PMM1-203ENST00000463617 SCRIBQ14160 1630 aa24.46■■□□□ 1.51
PMM1-203ENST00000463617 ABCC9O60706 1549 aa24.35■■□□□ 1.49
PMM1-203ENST00000463617 RSF1Q96T23 1441 aaPredicted RBP24.2■■□□□ 1.47
PMM1-203ENST00000463617 LOC105371045A0A1W2PR82 267 aa24.13■■□□□ 1.45
PMM1-203ENST00000463617 NACADO15069 1562 aa24.02■■□□□ 1.43
PMM1-203ENST00000463617 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
PMM1-203ENST00000463617 RB1CC1Q8TDY2 1594 aa23.95■■□□□ 1.42
PMM1-203ENST00000463617 PCGF6Q9BYE7 350 aa23.87■■□□□ 1.41
PMM1-203ENST00000463617 MROH2BQ7Z745 1585 aa23.85■■□□□ 1.41
PMM1-203ENST00000463617 TRIM41Q8WV44 630 aa23.72■■□□□ 1.39
PMM1-203ENST00000463617 WIZO95785 1651 aa23.71■■□□□ 1.39
PMM1-203ENST00000463617 HRCP23327 699 aa23.69■■□□□ 1.38
PMM1-203ENST00000463617 FAM9AQ8IZU1 332 aaPredicted RBP23.67■■□□□ 1.38
PMM1-203ENST00000463617 EHMT2Q96KQ7 1210 aa23.57■■□□□ 1.36
PMM1-203ENST00000463617 UNC13AQ9UPW8 1703 aa23.44■■□□□ 1.34
PMM1-203ENST00000463617 PPARGC1BQ86YN6 1023 aaKnown RBP23.44■■□□□ 1.34
PMM1-203ENST00000463617 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
PMM1-203ENST00000463617 PABPN1Q86U42 306 aaKnown RBP eCLIP23.35■■□□□ 1.33
PMM1-203ENST00000463617 TRIM26Q12899 539 aaPredicted RBP23.31■■□□□ 1.32
PMM1-203ENST00000463617 SMARCA4P51532 1647 aa23.3■■□□□ 1.32
PMM1-203ENST00000463617 EIF4G1Q04637 1599 aaKnown RBP23.28■■□□□ 1.32
PMM1-203ENST00000463617 CCDC88BA6NC98 1476 aa23.22■■□□□ 1.31
PMM1-203ENST00000463617 TOP2AP11388 1531 aaKnown RBP23.22■■□□□ 1.31
PMM1-203ENST00000463617 BICRAQ9NZM4 1560 aa23.18■■□□□ 1.3
PMM1-203ENST00000463617 ABCC8Q09428 1581 aa23.17■■□□□ 1.3
PMM1-203ENST00000463617 SMARCA2P51531 1590 aa23.15■■□□□ 1.3
PMM1-203ENST00000463617 SOGA1O94964 1423 aa22.94■■□□□ 1.26
PMM1-203ENST00000463617 RUSC2Q8N2Y8 1516 aa22.88■■□□□ 1.25
PMM1-203ENST00000463617 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
PMM1-203ENST00000463617 ATAD2BQ9ULI0 1458 aa22.77■■□□□ 1.24
PMM1-203ENST00000463617 TTBK1Q5TCY1 1321 aaPredicted RBP22.74■■□□□ 1.23
PMM1-203ENST00000463617 CSRNP3Q8WYN3 585 aa22.7■■□□□ 1.22
PMM1-203ENST00000463617 WRNQ14191 1432 aaPredicted RBP eCLIP22.68■■□□□ 1.22
PMM1-203ENST00000463617 CEP162Q5TB80 1403 aa22.67■■□□□ 1.22
PMM1-203ENST00000463617 BAZ1BQ9UIG0 1483 aaKnown RBP22.65■■□□□ 1.22
PMM1-203ENST00000463617 SYNJ1O43426 1573 aa22.64■■□□□ 1.22
PMM1-203ENST00000463617 UBTFP17480 764 aaKnown RBP22.62■■□□□ 1.21
PMM1-203ENST00000463617 TNIKQ9UKE5 1360 aa22.6■■□□□ 1.21
PMM1-203ENST00000463617 ZEB1P37275 1124 aaPredicted RBP22.59■■□□□ 1.21
PMM1-203ENST00000463617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.58■■□□□ 1.2
PMM1-203ENST00000463617 EEA1Q15075 1411 aa22.53■■□□□ 1.2
PMM1-203ENST00000463617 GOLGA3Q08378 1498 aa22.47■■□□□ 1.19
PMM1-203ENST00000463617 CCER1Q8TC90 406 aaPredicted RBP22.37■■□□□ 1.17
PMM1-203ENST00000463617 RANGAP1P46060 587 aaPredicted RBP22.36■■□□□ 1.17
PMM1-203ENST00000463617 RAPGEF2Q9Y4G8 1499 aa22.34■■□□□ 1.17
PMM1-203ENST00000463617 CEP164Q9UPV0 1460 aa22.33■■□□□ 1.17
PMM1-203ENST00000463617 KIF21BO75037 1637 aa22.31■■□□□ 1.16
PMM1-203ENST00000463617 NCAPD3P42695 1498 aa22.3■■□□□ 1.16
PMM1-203ENST00000463617 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
PMM1-203ENST00000463617 CLIP1P30622 1438 aa22.26■■□□□ 1.15
PMM1-203ENST00000463617 HMGXB3Q12766 1538 aa22.22■■□□□ 1.15
PMM1-203ENST00000463617 CUX1P39880 1505 aa22.19■■□□□ 1.14
PMM1-203ENST00000463617 BIVM-ERCC5R4GMW8 1640 aa22.18■■□□□ 1.14
PMM1-203ENST00000463617 VPS8Q8N3P4 1428 aa22.12■■□□□ 1.13
PMM1-203ENST00000463617 HNRNPUL2Q1KMD3 747 aaKnown RBP22.11■■□□□ 1.13
PMM1-203ENST00000463617 CFTRP13569 1480 aa22.1■■□□□ 1.13
PMM1-203ENST00000463617 PRXQ9BXM0 1461 aa22.07■■□□□ 1.12
PMM1-203ENST00000463617 ARAP1Q96P48 1450 aa21.97■■□□□ 1.11
PMM1-203ENST00000463617 APLP2Q06481 763 aa21.96■■□□□ 1.11
PMM1-203ENST00000463617 ERICH3Q5RHP9 1530 aa21.95■■□□□ 1.1
PMM1-203ENST00000463617 KIF27Q86VH2 1401 aa21.95■■□□□ 1.1
PMM1-203ENST00000463617 KANK4Q5T7N3 995 aaPredicted RBP21.94■■□□□ 1.1
PMM1-203ENST00000463617 CADPSQ9ULU8 1353 aa21.89■■□□□ 1.1
PMM1-203ENST00000463617 CC2D2AQ9P2K1 1620 aa21.87■■□□□ 1.09
PMM1-203ENST00000463617 DIEXFQ68CQ4 756 aaKnown RBP21.86■■□□□ 1.09
PMM1-203ENST00000463617 CUX2O14529 1486 aa21.84■■□□□ 1.09
PMM1-203ENST00000463617 IGF1RP08069 1367 aa21.83■■□□□ 1.09
PMM1-203ENST00000463617 SCAF1Q9H7N4 1312 aaKnown RBP21.83■■□□□ 1.08
PMM1-203ENST00000463617 PRDM2Q13029 1718 aa21.8■■□□□ 1.08
PMM1-203ENST00000463617 ARHGAP35Q9NRY4 1499 aa21.79■■□□□ 1.08
PMM1-203ENST00000463617 FGD5Q6ZNL6 1462 aa21.78■■□□□ 1.08
PMM1-203ENST00000463617 NESP48681 1621 aa21.72■■□□□ 1.07
PMM1-203ENST00000463617 ZNF316A6NFI3 1004 aaPredicted RBP21.71■■□□□ 1.07
PMM1-203ENST00000463617 CARMIL1Q5VZK9 1371 aa21.69■■□□□ 1.06
PMM1-203ENST00000463617 FANCD2Q9BXW9 1451 aa21.69■■□□□ 1.06
PMM1-203ENST00000463617 NEUROD1Q13562 356 aa21.67■■□□□ 1.06
PMM1-203ENST00000463617 RAD54L2Q9Y4B4 1467 aa21.67■■□□□ 1.06
PMM1-203ENST00000463617 DNAJC5BQ9UF47 199 aa21.66■■□□□ 1.06
PMM1-203ENST00000463617 P3H3Q8IVL6 736 aa21.63■■□□□ 1.05
PMM1-203ENST00000463617 ITGAEP38570 1179 aa21.6■■□□□ 1.05
PMM1-203ENST00000463617 DHX57Q6P158 1386 aaKnown RBP21.59■■□□□ 1.05
PMM1-203ENST00000463617 RRBP1Q9P2E9 1410 aaKnown RBP21.58■■□□□ 1.05
PMM1-203ENST00000463617 ACIN1Q9UKV3 1341 aaKnown RBP21.57■■□□□ 1.04
PMM1-203ENST00000463617 POLA1P09884 1462 aaPredicted RBP21.54■■□□□ 1.04
PMM1-203ENST00000463617 TOPBP1Q92547 1522 aa21.54■■□□□ 1.04
PMM1-203ENST00000463617 CCNB3Q8WWL7 1395 aa21.52■■□□□ 1.04
PMM1-203ENST00000463617 MIER1Q8N108 512 aa21.51■■□□□ 1.03
PMM1-203ENST00000463617 DNMBPQ6XZF7 1577 aa21.51■■□□□ 1.03
PMM1-203ENST00000463617 ABCA10Q8WWZ4 1543 aa21.47■■□□□ 1.03
PMM1-203ENST00000463617 ATP1B4Q9UN42 357 aaPredicted RBP21.47■■□□□ 1.03
PMM1-203ENST00000463617 TIAM1Q13009 1591 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms