RNA–Protein interactions for RNA: ENST00000501744.2

H2AFJ-202, Transcript of H2A histone family member J, humanhuman

TSL 1 (best)

Gene H2AFJ, Length 3,107 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFJ-202ENST00000501744 CHIC1Q5VXU3 224 aa17.16■□□□□ 0.34
H2AFJ-202ENST00000501744 AEBP2Q6ZN18 517 aaPredicted RBP17.09■□□□□ 0.33
H2AFJ-202ENST00000501744 NISCHQ9Y2I1 1504 aa16.04■□□□□ 0.16
H2AFJ-202ENST00000501744 PHF23Q9BUL5 403 aaPredicted RBP15.31■□□□□ 0.04
H2AFJ-202ENST00000501744 PLPPR3Q6T4P5 718 aa14.17□□□□□ -0.14
H2AFJ-202ENST00000501744 SENP3Q9H4L4 574 aaPredicted RBP14.16□□□□□ -0.14
H2AFJ-202ENST00000501744 DCAF8L2P0C7V8 631 aa14.04□□□□□ -0.16
H2AFJ-202ENST00000501744 SHROOM4Q9ULL8 1493 aa13.85□□□□□ -0.19
H2AFJ-202ENST00000501744 CCDC180Q9P1Z9 1646 aa13.73□□□□□ -0.21
H2AFJ-202ENST00000501744 ABCC9O60706 1549 aa13.65□□□□□ -0.22
H2AFJ-202ENST00000501744 ADRA2BP18089 450 aa13.53□□□□□ -0.24
H2AFJ-202ENST00000501744 ZCCHC6Q5VYS8 1495 aaKnown RBP13.43□□□□□ -0.26
H2AFJ-202ENST00000501744 PPP6R1Q9UPN7 881 aa13.35□□□□□ -0.27
H2AFJ-202ENST00000501744 SUPT5HO00267 1087 aaKnown RBP13.27□□□□□ -0.29
H2AFJ-202ENST00000501744 KCNA4P22459 653 aa13.24□□□□□ -0.29
H2AFJ-202ENST00000501744 FOXD1Q16676 465 aa13.22□□□□□ -0.29
H2AFJ-202ENST00000501744 EHMT2Q96KQ7 1210 aa13.21□□□□□ -0.29
H2AFJ-202ENST00000501744 SCRIBQ14160 1630 aa13.19□□□□□ -0.3
H2AFJ-202ENST00000501744 PABPN1Q86U42 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
H2AFJ-202ENST00000501744 DCAF1Q9Y4B6 1507 aa12.88□□□□□ -0.35
H2AFJ-202ENST00000501744 RB1CC1Q8TDY2 1594 aa12.84□□□□□ -0.35
H2AFJ-202ENST00000501744 NACADO15069 1562 aa12.83□□□□□ -0.35
H2AFJ-202ENST00000501744 UNC13AQ9UPW8 1703 aa12.83□□□□□ -0.36
H2AFJ-202ENST00000501744 CECR2Q9BXF3 1484 aa12.77□□□□□ -0.37
H2AFJ-202ENST00000501744 PPP4R3CPQ6ZMV5 832 aa12.65□□□□□ -0.38
H2AFJ-202ENST00000501744 CSRNP3Q8WYN3 585 aa12.65□□□□□ -0.38
H2AFJ-202ENST00000501744 MYO15BQ96JP2 1530 aa12.62□□□□□ -0.39
H2AFJ-202ENST00000501744 SLC4A1APQ9BWU0 796 aaKnown RBP12.62□□□□□ -0.39
H2AFJ-202ENST00000501744 PIAS4Q8N2W9 510 aaPredicted RBP12.62□□□□□ -0.39
H2AFJ-202ENST00000501744 MROH2BQ7Z745 1585 aa12.59□□□□□ -0.39
H2AFJ-202ENST00000501744 BICRAQ9NZM4 1560 aa12.59□□□□□ -0.39
H2AFJ-202ENST00000501744 WIZO95785 1651 aa12.57□□□□□ -0.4
H2AFJ-202ENST00000501744 RSF1Q96T23 1441 aaPredicted RBP12.56□□□□□ -0.4
H2AFJ-202ENST00000501744 FAM9AQ8IZU1 332 aaPredicted RBP12.4□□□□□ -0.43
H2AFJ-202ENST00000501744 NPM3O75607 178 aaKnown RBP12.37□□□□□ -0.43
H2AFJ-202ENST00000501744 SMARCA4P51532 1647 aa12.37□□□□□ -0.43
H2AFJ-202ENST00000501744 NCBP3Q53F19 620 aaKnown RBP12.35□□□□□ -0.43
H2AFJ-202ENST00000501744 BAZ1AQ9NRL2 1556 aaPredicted RBP12.33□□□□□ -0.44
H2AFJ-202ENST00000501744 DNAJC5BQ9UF47 199 aa12.32□□□□□ -0.44
H2AFJ-202ENST00000501744 ZBTB22O15209 634 aa12.26□□□□□ -0.45
H2AFJ-202ENST00000501744 LOC105371045A0A1W2PR82 267 aa12.24□□□□□ -0.45
H2AFJ-202ENST00000501744 EIF4G1Q04637 1599 aaKnown RBP12.23□□□□□ -0.45
H2AFJ-202ENST00000501744 CCDC88BA6NC98 1476 aa12.19□□□□□ -0.46
H2AFJ-202ENST00000501744 TRIM41Q8WV44 630 aa12.19□□□□□ -0.46
H2AFJ-202ENST00000501744 ABCC8Q09428 1581 aa12.18□□□□□ -0.46
H2AFJ-202ENST00000501744 ATAD2BQ9ULI0 1458 aa12.17□□□□□ -0.46
H2AFJ-202ENST00000501744 BAZ1BQ9UIG0 1483 aaKnown RBP12.16□□□□□ -0.46
H2AFJ-202ENST00000501744 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
H2AFJ-202ENST00000501744 TOP2AP11388 1531 aaKnown RBP12.13□□□□□ -0.47
H2AFJ-202ENST00000501744 CC2D2AQ9P2K1 1620 aa12.13□□□□□ -0.47
H2AFJ-202ENST00000501744 PELP1Q8IZL8 1130 aaKnown RBP12.08□□□□□ -0.48
H2AFJ-202ENST00000501744 CNKSR2Q8WXI2 1034 aa12.06□□□□□ -0.48
H2AFJ-202ENST00000501744 RANGAP1P46060 587 aaPredicted RBP12.04□□□□□ -0.48
H2AFJ-202ENST00000501744 NESP48681 1621 aa12□□□□□ -0.49
H2AFJ-202ENST00000501744 HRCP23327 699 aa11.99□□□□□ -0.49
H2AFJ-202ENST00000501744 MAPK8IP2Q13387 824 aaPredicted RBP11.96□□□□□ -0.49
H2AFJ-202ENST00000501744 PPARGC1BQ86YN6 1023 aaKnown RBP11.96□□□□□ -0.5
H2AFJ-202ENST00000501744 TTBK1Q5TCY1 1321 aaPredicted RBP11.95□□□□□ -0.5
H2AFJ-202ENST00000501744 PEG3Q9GZU2 1588 aa11.94□□□□□ -0.5
H2AFJ-202ENST00000501744 RUSC2Q8N2Y8 1516 aa11.93□□□□□ -0.5
H2AFJ-202ENST00000501744 SCAF1Q9H7N4 1312 aaKnown RBP11.9□□□□□ -0.5
H2AFJ-202ENST00000501744 NCAPD3P42695 1498 aa11.9□□□□□ -0.5
H2AFJ-202ENST00000501744 SOGA1O94964 1423 aa11.9□□□□□ -0.5
H2AFJ-202ENST00000501744 SYNJ1O43426 1573 aa11.87□□□□□ -0.51
H2AFJ-202ENST00000501744 HMGXB3Q12766 1538 aa11.84□□□□□ -0.51
H2AFJ-202ENST00000501744 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
H2AFJ-202ENST00000501744 WRNQ14191 1432 aaPredicted RBP eCLIP11.83□□□□□ -0.52
H2AFJ-202ENST00000501744 UBTFP17480 764 aaKnown RBP11.77□□□□□ -0.53
H2AFJ-202ENST00000501744 CADPSQ9ULU8 1353 aa11.74□□□□□ -0.53
H2AFJ-202ENST00000501744 MSH5O43196 834 aa11.73□□□□□ -0.53
H2AFJ-202ENST00000501744 CUX1P39880 1505 aa11.72□□□□□ -0.53
H2AFJ-202ENST00000501744 CFTRP13569 1480 aa11.72□□□□□ -0.53
H2AFJ-202ENST00000501744 MYT1Q01538 1121 aa11.71□□□□□ -0.54
H2AFJ-202ENST00000501744 FANCD2Q9BXW9 1451 aa11.7□□□□□ -0.54
H2AFJ-202ENST00000501744 KIF21AQ7Z4S6 1674 aa11.7□□□□□ -0.54
H2AFJ-202ENST00000501744 RAD54L2Q9Y4B4 1467 aa11.68□□□□□ -0.54
H2AFJ-202ENST00000501744 PCGF6Q9BYE7 350 aa11.66□□□□□ -0.54
H2AFJ-202ENST00000501744 RNF216Q9NWF9 866 aaPredicted RBP11.65□□□□□ -0.54
H2AFJ-202ENST00000501744 RTN4Q9NQC3 1192 aaKnown RBP11.63□□□□□ -0.55
H2AFJ-202ENST00000501744 FGD5Q6ZNL6 1462 aa11.63□□□□□ -0.55
H2AFJ-202ENST00000501744 TDRD9Q8NDG6 1382 aaKnown RBP11.61□□□□□ -0.55
H2AFJ-202ENST00000501744 P3H3Q8IVL6 736 aa11.61□□□□□ -0.55
H2AFJ-202ENST00000501744 TOP2BQ02880 1626 aa11.6□□□□□ -0.55
H2AFJ-202ENST00000501744 CUX2O14529 1486 aa11.6□□□□□ -0.55
H2AFJ-202ENST00000501744 CEP164Q9UPV0 1460 aa11.59□□□□□ -0.55
H2AFJ-202ENST00000501744 PRDM2Q13029 1718 aa11.59□□□□□ -0.55
H2AFJ-202ENST00000501744 ERCC6Q03468 1493 aa11.59□□□□□ -0.55
H2AFJ-202ENST00000501744 RAPGEF2Q9Y4G8 1499 aa11.59□□□□□ -0.55
H2AFJ-202ENST00000501744 URB2Q14146 1524 aaKnown RBP11.58□□□□□ -0.55
H2AFJ-202ENST00000501744 SLC4A2P04920 1241 aa11.56□□□□□ -0.56
H2AFJ-202ENST00000501744 TOPBP1Q92547 1522 aa11.55□□□□□ -0.56
H2AFJ-202ENST00000501744 BIVM-ERCC5R4GMW8 1640 aa11.54□□□□□ -0.56
H2AFJ-202ENST00000501744 POLA1P09884 1462 aaPredicted RBP11.54□□□□□ -0.56
H2AFJ-202ENST00000501744 FBLN2P98095 1184 aa11.53□□□□□ -0.56
H2AFJ-202ENST00000501744 ATP1B4Q9UN42 357 aaPredicted RBP11.52□□□□□ -0.56
H2AFJ-202ENST00000501744 ARID3CA6NKF2 412 aa11.52□□□□□ -0.57
H2AFJ-202ENST00000501744 LAMC3Q9Y6N6 1575 aa11.51□□□□□ -0.57
H2AFJ-202ENST00000501744 CEP162Q5TB80 1403 aa11.5□□□□□ -0.57
H2AFJ-202ENST00000501744 PDS5BQ9NTI5 1447 aa11.5□□□□□ -0.57
H2AFJ-202ENST00000501744 AQRO60306 1485 aaKnown RBP eCLIP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms