Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
HLA-BQ31612 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HLA-BQ31612 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HLA-BQ31612 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.93■□□□□ 0.94
HLA-BQ31612 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-BQ31612 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-BQ31612 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-BQ31612 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.93■□□□□ 0.94
HLA-BQ31612 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.93■□□□□ 0.94
HLA-BQ31612 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-BQ31612 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.93■□□□□ 0.94
HLA-BQ31612 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
HLA-BQ31612 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.93■□□□□ 0.94
HLA-BQ31612 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
HLA-BQ31612 AC008694.1-202ENST00000636953 945 ntBASIC20.93■□□□□ 0.94
HLA-BQ31612 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-BQ31612 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.93■□□□□ 0.94
HLA-BQ31612 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-BQ31612 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-BQ31612 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-BQ31612 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-BQ31612 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.92■□□□□ 0.94
HLA-BQ31612 LINC00526-201ENST00000581067 1875 ntBASIC20.92■□□□□ 0.94
HLA-BQ31612 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.92■□□□□ 0.94
HLA-BQ31612 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-BQ31612 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-BQ31612 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
HLA-BQ31612 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.92■□□□□ 0.94
HLA-BQ31612 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-BQ31612 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-BQ31612 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-BQ31612 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-BQ31612 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-BQ31612 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-BQ31612 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-BQ31612 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-BQ31612 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-BQ31612 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-BQ31612 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-BQ31612 AC093787.1-201ENST00000450396 207 ntBASIC20.91■□□□□ 0.94
HLA-BQ31612 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-BQ31612 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-BQ31612 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.91■□□□□ 0.94
HLA-BQ31612 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
HLA-BQ31612 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.91■□□□□ 0.94
HLA-BQ31612 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.91■□□□□ 0.94
HLA-BQ31612 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.91■□□□□ 0.94
HLA-BQ31612 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.91■□□□□ 0.94
HLA-BQ31612 AC069236.1-201ENST00000604339 616 ntBASIC20.91■□□□□ 0.94
HLA-BQ31612 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.91■□□□□ 0.94
HLA-BQ31612 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.91■□□□□ 0.94
HLA-BQ31612 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
HLA-BQ31612 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-BQ31612 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-BQ31612 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-BQ31612 AP006587.3-201ENST00000525742 1516 ntBASIC20.9■□□□□ 0.94
HLA-BQ31612 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HLA-BQ31612 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-BQ31612 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-BQ31612 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
HLA-BQ31612 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-BQ31612 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-BQ31612 AL512625.2-201ENST00000417533 625 ntBASIC20.9■□□□□ 0.94
HLA-BQ31612 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.9■□□□□ 0.94
HLA-BQ31612 AC016405.3-201ENST00000607710 860 ntBASIC20.9■□□□□ 0.94
HLA-BQ31612 AC092118.2-201ENST00000613495 667 ntBASIC20.9■□□□□ 0.94
HLA-BQ31612 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HLA-BQ31612 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-BQ31612 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.89■□□□□ 0.94
HLA-BQ31612 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
HLA-BQ31612 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-BQ31612 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-BQ31612 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
HLA-BQ31612 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-BQ31612 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.89■□□□□ 0.93
HLA-BQ31612 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.89■□□□□ 0.93
HLA-BQ31612 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
HLA-BQ31612 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.89■□□□□ 0.93
HLA-BQ31612 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.89■□□□□ 0.93
HLA-BQ31612 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-BQ31612 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-BQ31612 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-BQ31612 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.89■□□□□ 0.93
HLA-BQ31612 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-BQ31612 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
HLA-BQ31612 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-BQ31612 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.88■□□□□ 0.93
HLA-BQ31612 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-BQ31612 PRORSD1P-201ENST00000295112 541 ntBASIC20.88■□□□□ 0.93
HLA-BQ31612 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.88■□□□□ 0.93
HLA-BQ31612 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-BQ31612 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.88■□□□□ 0.93
HLA-BQ31612 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
HLA-BQ31612 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.88■□□□□ 0.93
HLA-BQ31612 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
HLA-BQ31612 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.88■□□□□ 0.93
HLA-BQ31612 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-BQ31612 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-BQ31612 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-BQ31612 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms