Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CD4P01730 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CD4P01730 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CD4P01730 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CD4P01730 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.75■■□□□ 1.39
CD4P01730 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.75■■□□□ 1.39
CD4P01730 MIPEPP3-201ENST00000412105 444 ntBASIC23.75■■□□□ 1.39
CD4P01730 TERF1P5-201ENST00000477545 1207 ntBASIC23.75■■□□□ 1.39
CD4P01730 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.75■■□□□ 1.39
CD4P01730 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.75■■□□□ 1.39
CD4P01730 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.75■■□□□ 1.39
CD4P01730 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CD4P01730 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CD4P01730 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.75■■□□□ 1.39
CD4P01730 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.75■■□□□ 1.39
CD4P01730 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CD4P01730 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CD4P01730 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.75■■□□□ 1.39
CD4P01730 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CD4P01730 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CD4P01730 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CD4P01730 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.74■■□□□ 1.39
CD4P01730 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.74■■□□□ 1.39
CD4P01730 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.74■■□□□ 1.39
CD4P01730 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CD4P01730 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.74■■□□□ 1.39
CD4P01730 AC079089.2-201ENST00000531211 1277 ntBASIC23.74■■□□□ 1.39
CD4P01730 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CD4P01730 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CD4P01730 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CD4P01730 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CD4P01730 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CD4P01730 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CD4P01730 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CD4P01730 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CD4P01730 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.73■■□□□ 1.39
CD4P01730 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.73■■□□□ 1.39
CD4P01730 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
CD4P01730 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.73■■□□□ 1.39
CD4P01730 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CD4P01730 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CD4P01730 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CD4P01730 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CD4P01730 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CD4P01730 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CD4P01730 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CD4P01730 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.72■■□□□ 1.39
CD4P01730 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CD4P01730 CYP2T1P-201ENST00000432607 1285 ntBASIC23.72■■□□□ 1.39
CD4P01730 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CD4P01730 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.72■■□□□ 1.39
CD4P01730 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.72■■□□□ 1.39
CD4P01730 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CD4P01730 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CD4P01730 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CD4P01730 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CD4P01730 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CD4P01730 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CD4P01730 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.71■■□□□ 1.39
CD4P01730 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.71■■□□□ 1.39
CD4P01730 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.71■■□□□ 1.39
CD4P01730 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
CD4P01730 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.71■■□□□ 1.39
CD4P01730 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.71■■□□□ 1.39
CD4P01730 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.71■■□□□ 1.39
CD4P01730 PRORSD1P-201ENST00000295112 541 ntBASIC23.71■■□□□ 1.39
CD4P01730 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
CD4P01730 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.71■■□□□ 1.39
CD4P01730 AC007322.4-201ENST00000509611 723 ntBASIC23.71■■□□□ 1.39
CD4P01730 RNA5SP413-201ENST00000516373 109 ntBASIC23.71■■□□□ 1.39
CD4P01730 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.71■■□□□ 1.39
CD4P01730 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.71■■□□□ 1.39
CD4P01730 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
CD4P01730 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
CD4P01730 MKRN4P-201ENST00000444706 1521 ntBASIC23.7■■□□□ 1.38
CD4P01730 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CD4P01730 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CD4P01730 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CD4P01730 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.7■■□□□ 1.38
CD4P01730 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CD4P01730 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CD4P01730 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CD4P01730 KRT18P29-201ENST00000397031 1267 ntBASIC23.7■■□□□ 1.38
CD4P01730 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.7■■□□□ 1.38
CD4P01730 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CD4P01730 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CD4P01730 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CD4P01730 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CD4P01730 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.69■■□□□ 1.38
CD4P01730 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CD4P01730 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CD4P01730 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.69■■□□□ 1.38
CD4P01730 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.69■■□□□ 1.38
CD4P01730 EEF1DP3-203ENST00000566025 782 ntBASIC23.69■■□□□ 1.38
CD4P01730 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.69■■□□□ 1.38
CD4P01730 AP004607.7-201ENST00000527152 1677 ntBASIC23.69■■□□□ 1.38
CD4P01730 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.69■■□□□ 1.38
CD4P01730 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CD4P01730 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.68■■□□□ 1.38
CD4P01730 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms