Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.23■□□□□ 0.35
SRRM4A7MD48 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRRM4A7MD48 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.23■□□□□ 0.35
SRRM4A7MD48 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.23■□□□□ 0.35
SRRM4A7MD48 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRRM4A7MD48 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRRM4A7MD48 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SRRM4A7MD48 Z98882.1-201ENST00000622160 2253 ntBASIC17.23■□□□□ 0.35
SRRM4A7MD48 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRRM4A7MD48 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
SRRM4A7MD48 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRRM4A7MD48 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRRM4A7MD48 AC135279.3-201ENST00000610945 1311 ntBASIC17.22■□□□□ 0.35
SRRM4A7MD48 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.22■□□□□ 0.35
SRRM4A7MD48 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRRM4A7MD48 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SRRM4A7MD48 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.22■□□□□ 0.35
SRRM4A7MD48 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.22■□□□□ 0.35
SRRM4A7MD48 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SRRM4A7MD48 AC233992.3-201ENST00000607491 485 ntBASIC17.22■□□□□ 0.35
SRRM4A7MD48 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.22■□□□□ 0.35
SRRM4A7MD48 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SRRM4A7MD48 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRRM4A7MD48 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRRM4A7MD48 AP004607.7-201ENST00000527152 1677 ntBASIC17.22■□□□□ 0.35
SRRM4A7MD48 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SRRM4A7MD48 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRRM4A7MD48 AC005229.4-201ENST00000610085 2198 ntBASIC17.22■□□□□ 0.35
SRRM4A7MD48 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRRM4A7MD48 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.21■□□□□ 0.35
SRRM4A7MD48 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRRM4A7MD48 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRRM4A7MD48 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SRRM4A7MD48 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRRM4A7MD48 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRRM4A7MD48 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.21■□□□□ 0.35
SRRM4A7MD48 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SRRM4A7MD48 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRRM4A7MD48 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SRRM4A7MD48 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.21■□□□□ 0.35
SRRM4A7MD48 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.21■□□□□ 0.35
SRRM4A7MD48 AC133561.4-201ENST00000566112 224 ntBASIC17.21■□□□□ 0.35
SRRM4A7MD48 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.21■□□□□ 0.35
SRRM4A7MD48 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRRM4A7MD48 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SRRM4A7MD48 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SRRM4A7MD48 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRRM4A7MD48 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRRM4A7MD48 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.2■□□□□ 0.34
SRRM4A7MD48 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.2■□□□□ 0.34
SRRM4A7MD48 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.2■□□□□ 0.34
SRRM4A7MD48 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SRRM4A7MD48 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRRM4A7MD48 AC096631.2-201ENST00000436136 790 ntBASIC17.2■□□□□ 0.34
SRRM4A7MD48 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.2■□□□□ 0.34
SRRM4A7MD48 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.2■□□□□ 0.34
SRRM4A7MD48 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRRM4A7MD48 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.2■□□□□ 0.34
SRRM4A7MD48 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRRM4A7MD48 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRRM4A7MD48 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRRM4A7MD48 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRRM4A7MD48 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SRRM4A7MD48 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SRRM4A7MD48 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.2■□□□□ 0.34
SRRM4A7MD48 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SRRM4A7MD48 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRRM4A7MD48 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.19■□□□□ 0.34
SRRM4A7MD48 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRRM4A7MD48 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.19■□□□□ 0.34
SRRM4A7MD48 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
SRRM4A7MD48 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRRM4A7MD48 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRRM4A7MD48 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.19■□□□□ 0.34
SRRM4A7MD48 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.19■□□□□ 0.34
SRRM4A7MD48 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.19■□□□□ 0.34
SRRM4A7MD48 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRRM4A7MD48 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SRRM4A7MD48 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.19■□□□□ 0.34
SRRM4A7MD48 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.19■□□□□ 0.34
SRRM4A7MD48 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRRM4A7MD48 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SRRM4A7MD48 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.19■□□□□ 0.34
SRRM4A7MD48 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRRM4A7MD48 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRRM4A7MD48 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRRM4A7MD48 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRRM4A7MD48 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRRM4A7MD48 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.18■□□□□ 0.34
SRRM4A7MD48 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRRM4A7MD48 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRRM4A7MD48 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRRM4A7MD48 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRRM4A7MD48 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
SRRM4A7MD48 PBX2P1-201ENST00000493219 1291 ntBASIC17.18■□□□□ 0.34
SRRM4A7MD48 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRRM4A7MD48 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRRM4A7MD48 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.18■□□□□ 0.34
SRRM4A7MD48 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SRRM4A7MD48 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms