Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TVP23AA6NH52 SERBP1P1-201ENST00000396021 1160 ntBASIC19.08■□□□□ 0.64
TVP23AA6NH52 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.08■□□□□ 0.64
TVP23AA6NH52 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TVP23AA6NH52 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TVP23AA6NH52 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.08■□□□□ 0.64
TVP23AA6NH52 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.08■□□□□ 0.64
TVP23AA6NH52 AC068587.7-201ENST00000641602 218 ntBASIC19.08■□□□□ 0.64
TVP23AA6NH52 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.08■□□□□ 0.64
TVP23AA6NH52 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TVP23AA6NH52 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TVP23AA6NH52 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TVP23AA6NH52 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TVP23AA6NH52 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.08■□□□□ 0.64
TVP23AA6NH52 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.07■□□□□ 0.64
TVP23AA6NH52 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.07■□□□□ 0.64
TVP23AA6NH52 Z98882.1-201ENST00000622160 2253 ntBASIC19.07■□□□□ 0.64
TVP23AA6NH52 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.07■□□□□ 0.64
TVP23AA6NH52 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TVP23AA6NH52 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TVP23AA6NH52 AC087239.1-201ENST00000622671 572 ntBASIC19.07■□□□□ 0.64
TVP23AA6NH52 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TVP23AA6NH52 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TVP23AA6NH52 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TVP23AA6NH52 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.07■□□□□ 0.64
TVP23AA6NH52 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TVP23AA6NH52 SYT6-210ENST00000641643 1587 ntBASIC19.06■□□□□ 0.64
TVP23AA6NH52 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
TVP23AA6NH52 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.06■□□□□ 0.64
TVP23AA6NH52 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.06■□□□□ 0.64
TVP23AA6NH52 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TVP23AA6NH52 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TVP23AA6NH52 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TVP23AA6NH52 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.06■□□□□ 0.64
TVP23AA6NH52 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.06■□□□□ 0.64
TVP23AA6NH52 AC010141.3-201ENST00000456659 717 ntBASIC19.06■□□□□ 0.64
TVP23AA6NH52 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TVP23AA6NH52 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TVP23AA6NH52 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TVP23AA6NH52 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TVP23AA6NH52 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.06■□□□□ 0.64
TVP23AA6NH52 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TVP23AA6NH52 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TVP23AA6NH52 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TVP23AA6NH52 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TVP23AA6NH52 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.05■□□□□ 0.64
TVP23AA6NH52 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TVP23AA6NH52 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.05■□□□□ 0.64
TVP23AA6NH52 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TVP23AA6NH52 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TVP23AA6NH52 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TVP23AA6NH52 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TVP23AA6NH52 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.05■□□□□ 0.64
TVP23AA6NH52 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TVP23AA6NH52 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
TVP23AA6NH52 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TVP23AA6NH52 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TVP23AA6NH52 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TVP23AA6NH52 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TVP23AA6NH52 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TVP23AA6NH52 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TVP23AA6NH52 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TVP23AA6NH52 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TVP23AA6NH52 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.04■□□□□ 0.64
TVP23AA6NH52 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TVP23AA6NH52 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.04■□□□□ 0.64
TVP23AA6NH52 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.04■□□□□ 0.64
TVP23AA6NH52 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.04■□□□□ 0.64
TVP23AA6NH52 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.04■□□□□ 0.64
TVP23AA6NH52 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.04■□□□□ 0.64
TVP23AA6NH52 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TVP23AA6NH52 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TVP23AA6NH52 AF106564.1-201ENST00000607058 2553 ntBASIC19.03■□□□□ 0.64
TVP23AA6NH52 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.03■□□□□ 0.64
TVP23AA6NH52 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TVP23AA6NH52 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.03■□□□□ 0.64
TVP23AA6NH52 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TVP23AA6NH52 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.03■□□□□ 0.64
TVP23AA6NH52 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
TVP23AA6NH52 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TVP23AA6NH52 AC131281.2-201ENST00000520478 145 ntBASIC19.03■□□□□ 0.64
TVP23AA6NH52 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.03■□□□□ 0.64
TVP23AA6NH52 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TVP23AA6NH52 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TVP23AA6NH52 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TVP23AA6NH52 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TVP23AA6NH52 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TVP23AA6NH52 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TVP23AA6NH52 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TVP23AA6NH52 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TVP23AA6NH52 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TVP23AA6NH52 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TVP23AA6NH52 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TVP23AA6NH52 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.02■□□□□ 0.64
TVP23AA6NH52 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.02■□□□□ 0.64
TVP23AA6NH52 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.02■□□□□ 0.64
TVP23AA6NH52 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.02■□□□□ 0.64
TVP23AA6NH52 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TVP23AA6NH52 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.02■□□□□ 0.64
TVP23AA6NH52 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms