Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HCK-211ENST00000639405 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 UFSP2-201ENST00000264689 1630 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 CEP63-216ENST00000620544 1601 ntTSL 5 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 ABCC8-202ENST00000389817 4921 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 NCAM1-229ENST00000621518 4922 ntTSL 5 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 CLEC4M-208ENST00000596363 1669 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 FUT6-203ENST00000524754 2598 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 CHEK1-201ENST00000278916 1712 ntTSL 5 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 AC245884.11-201ENST00000616950 1734 ntTSL 3 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 GDF9-207ENST00000624495 1799 ntTSL 2 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 OS9-202ENST00000315970 2691 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 VPS33B-201ENST00000333371 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 AC130456.2-201ENST00000563613 1937 ntTSL 5 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 DDX3P1-201ENST00000418231 1950 ntBASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 AL357140.3-201ENST00000639753 1983 ntBASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 KCNMB1-201ENST00000274629 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 AC092335.1-201ENST00000509037 2066 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 PACSIN1-201ENST00000244458 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 PACSIN1-202ENST00000374043 4229 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 MYO5B-201ENST00000285039 9505 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 AC055813.1-201ENST00000587110 2123 ntBASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 AC009264.1-205ENST00000439694 2160 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 ALAS1-201ENST00000310271 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 LAMA3-203ENST00000399516 9834 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 TYRL-201ENST00000243152 441 ntBASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 MCEE-201ENST00000244217 835 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 MLN-201ENST00000266003 527 ntTSL 5 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 CST2-201ENST00000304725 748 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 IFT43-202ENST00000314067 833 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 CD79B-202ENST00000349817 378 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 DPCD-201ENST00000370147 641 ntTSL 2 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 FEN1P1-201ENST00000401028 1145 ntBASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 PYY3-201ENST00000419078 213 ntBASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 AL353807.2-201ENST00000456382 220 ntTSL 5 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 TCL6-204ENST00000460130 911 ntTSL 3 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 RN7SL398P-201ENST00000470244 298 ntBASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 CLCN5-205ENST00000482218 449 ntTSL 3 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 AC117402.1-201ENST00000485473 856 ntTSL 3 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 Z70280.1-201ENST00000490943 295 ntBASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 AC106774.3-201ENST00000505444 169 ntBASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 AL732372.3-201ENST00000514436 1239 ntBASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 PA2G4-206ENST00000552766 1085 ntTSL 5 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 PSMA4-219ENST00000560217 944 ntTSL 5 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 MIR4418-201ENST00000581169 62 ntBASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 AC026367.1-201ENST00000605329 611 ntTSL 2 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 PTMAP5-202ENST00000607242 1162 ntBASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 AL590491.2-202ENST00000611126 418 ntTSL 5 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 UROD-221ENST00000636293 1102 ntTSL 5 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 SEPT9-206ENST00000431235 4004 ntTSL 5 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 AC010485.1-201ENST00000589967 1389 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 CAMTA2-201ENST00000348066 4491 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 RCBTB2-202ENST00000430805 3179 ntTSL 2 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 MOB1A-201ENST00000396049 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 SELENOK-204ENST00000495461 1633 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 AC092117.2-201ENST00000623937 1659 ntBASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 MATN2-218ENST00000524308 3449 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 OVCH2-203ENST00000612000 1730 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 GPR158-201ENST00000376351 6959 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 USF1-203ENST00000368021 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 RAET1K-202ENST00000533735 1883 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 PPP1R26P3-201ENST00000612861 3800 ntBASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 ZNF442-203ENST00000438182 1906 ntTSL 2 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 DOCK2-201ENST00000256935 6097 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 HSPA8-201ENST00000227378 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 PKP4P1-201ENST00000426801 2158 ntBASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 KANSL1-211ENST00000575318 4935 ntTSL 5 BASIC10.72□□□□□ -0.69
NPIPA3F8WFD2 KANSL1-201ENST00000262419 5309 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 STAT6-220ENST00000556155 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 MYO18A-209ENST00000531253 7504 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 CORO1C-201ENST00000261401 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 TOPORS-201ENST00000360538 4098 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 TACR1-201ENST00000305249 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 TMEM33-202ENST00000325094 6221 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 MED8-201ENST00000290663 1483 ntTSL 5 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 PGM2L1-201ENST00000298198 8515 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 C14orf93-201ENST00000299088 3354 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 SNAPC5-201ENST00000307979 794 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 DSCR3-201ENST00000309117 3256 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 RPL10A-201ENST00000322203 716 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 C19orf71-201ENST00000329493 674 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 UGT3A1-202ENST00000333811 1114 ntTSL 5 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 KRTAP19-2-201ENST00000334055 380 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 BORCS7-201ENST00000339834 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 COLQ-201ENST00000383781 2784 ntTSL 5 BASIC10.71□□□□□ -0.69
NPIPA3F8WFD2 PPIL3-202ENST00000392283 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms