RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 NISCHQ9Y2I1 1504 aa22.78■■□□□ 1.24
PACSIN1-202ENST00000374043 DCAF8L2P0C7V8 631 aa21.3■■□□□ 1
PACSIN1-202ENST00000374043 SHROOM4Q9ULL8 1493 aa20.93■□□□□ 0.94
PACSIN1-202ENST00000374043 SUPT5HO00267 1087 aaKnown RBP20.74■□□□□ 0.91
PACSIN1-202ENST00000374043 EHMT2Q96KQ7 1210 aa19.74■□□□□ 0.75
PACSIN1-202ENST00000374043 FAM9AQ8IZU1 332 aaPredicted RBP19.42■□□□□ 0.7
PACSIN1-202ENST00000374043 PCGF6Q9BYE7 350 aa19.24■□□□□ 0.67
PACSIN1-202ENST00000374043 CHIC1Q5VXU3 224 aa19.22■□□□□ 0.67
PACSIN1-202ENST00000374043 LOC105371045A0A1W2PR82 267 aa19.13■□□□□ 0.65
PACSIN1-202ENST00000374043 TRIM41Q8WV44 630 aa19.05■□□□□ 0.64
PACSIN1-202ENST00000374043 ZCCHC6Q5VYS8 1495 aaKnown RBP19.03■□□□□ 0.64
PACSIN1-202ENST00000374043 ABCC9O60706 1549 aa19.02■□□□□ 0.64
PACSIN1-202ENST00000374043 TTBK1Q5TCY1 1321 aaPredicted RBP18.98■□□□□ 0.63
PACSIN1-202ENST00000374043 PPARGC1BQ86YN6 1023 aaKnown RBP18.86■□□□□ 0.61
PACSIN1-202ENST00000374043 CCDC180Q9P1Z9 1646 aa18.73■□□□□ 0.59
PACSIN1-202ENST00000374043 RANGAP1P46060 587 aaPredicted RBP18.72■□□□□ 0.59
PACSIN1-202ENST00000374043 PABPN1Q86U42 306 aaKnown RBP eCLIP18.68■□□□□ 0.58
PACSIN1-202ENST00000374043 SCRIBQ14160 1630 aa18.58■□□□□ 0.56
PACSIN1-202ENST00000374043 MYO15BQ96JP2 1530 aa18.54■□□□□ 0.56
PACSIN1-202ENST00000374043 HRCP23327 699 aa18.5■□□□□ 0.55
PACSIN1-202ENST00000374043 UBTFP17480 764 aaKnown RBP18.48■□□□□ 0.55
PACSIN1-202ENST00000374043 TRIM26Q12899 539 aaPredicted RBP18.41■□□□□ 0.54
PACSIN1-202ENST00000374043 CCER1Q8TC90 406 aaPredicted RBP18.28■□□□□ 0.52
PACSIN1-202ENST00000374043 APLP2Q06481 763 aa18.27■□□□□ 0.52
PACSIN1-202ENST00000374043 RSF1Q96T23 1441 aaPredicted RBP18.24■□□□□ 0.51
PACSIN1-202ENST00000374043 CECR2Q9BXF3 1484 aa18.13■□□□□ 0.49
PACSIN1-202ENST00000374043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.12■□□□□ 0.49
PACSIN1-202ENST00000374043 DCAF1Q9Y4B6 1507 aa18.08■□□□□ 0.48
PACSIN1-202ENST00000374043 ATP1B4Q9UN42 357 aaPredicted RBP18.07■□□□□ 0.48
PACSIN1-202ENST00000374043 ZEB1P37275 1124 aaPredicted RBP18.03■□□□□ 0.48
PACSIN1-202ENST00000374043 HNRNPUL2Q1KMD3 747 aaKnown RBP18.01■□□□□ 0.47
PACSIN1-202ENST00000374043 ITGAEP38570 1179 aa17.9■□□□□ 0.46
PACSIN1-202ENST00000374043 RB1CC1Q8TDY2 1594 aa17.88■□□□□ 0.45
PACSIN1-202ENST00000374043 CSRNP3Q8WYN3 585 aa17.86■□□□□ 0.45
PACSIN1-202ENST00000374043 MROH2BQ7Z745 1585 aa17.86■□□□□ 0.45
PACSIN1-202ENST00000374043 NACADO15069 1562 aa17.85■□□□□ 0.45
PACSIN1-202ENST00000374043 YTHDC1Q96MU7 727 aaKnown RBP17.78■□□□□ 0.44
PACSIN1-202ENST00000374043 WIZO95785 1651 aa17.65■□□□□ 0.42
PACSIN1-202ENST00000374043 P3H3Q8IVL6 736 aa17.6■□□□□ 0.41
PACSIN1-202ENST00000374043 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
PACSIN1-202ENST00000374043 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
PACSIN1-202ENST00000374043 SOGA1O94964 1423 aa17.57■□□□□ 0.4
PACSIN1-202ENST00000374043 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
PACSIN1-202ENST00000374043 DIEXFQ68CQ4 756 aaKnown RBP17.52■□□□□ 0.4
PACSIN1-202ENST00000374043 CENPBP07199 599 aaPredicted RBP17.48■□□□□ 0.39
PACSIN1-202ENST00000374043 CEP162Q5TB80 1403 aa17.46■□□□□ 0.38
PACSIN1-202ENST00000374043 WRNQ14191 1432 aaPredicted RBP eCLIP17.45■□□□□ 0.38
PACSIN1-202ENST00000374043 FAM50AQ14320 339 aaKnown RBP17.44■□□□□ 0.38
PACSIN1-202ENST00000374043 BAZ1BQ9UIG0 1483 aaKnown RBP17.4■□□□□ 0.38
PACSIN1-202ENST00000374043 ARID3CA6NKF2 412 aa17.39■□□□□ 0.37
PACSIN1-202ENST00000374043 RUSC2Q8N2Y8 1516 aa17.35■□□□□ 0.37
PACSIN1-202ENST00000374043 CLIP1P30622 1438 aa17.33■□□□□ 0.36
PACSIN1-202ENST00000374043 NEUROD1Q13562 356 aa17.32■□□□□ 0.36
PACSIN1-202ENST00000374043 TNIKQ9UKE5 1360 aa17.27■□□□□ 0.36
PACSIN1-202ENST00000374043 TOP2AP11388 1531 aaKnown RBP17.25■□□□□ 0.35
PACSIN1-202ENST00000374043 GOLGA3Q08378 1498 aa17.25■□□□□ 0.35
PACSIN1-202ENST00000374043 ZNF316A6NFI3 1004 aaPredicted RBP17.24■□□□□ 0.35
PACSIN1-202ENST00000374043 SMARCA4P51532 1647 aa17.24■□□□□ 0.35
PACSIN1-202ENST00000374043 CNGB1Q14028 1251 aaPredicted RBP17.2■□□□□ 0.34
PACSIN1-202ENST00000374043 FBLN2P98095 1184 aa17.17■□□□□ 0.34
PACSIN1-202ENST00000374043 EEA1Q15075 1411 aa17.16■□□□□ 0.34
PACSIN1-202ENST00000374043 GTF3C3Q9Y5Q9 886 aa17.15■□□□□ 0.34
PACSIN1-202ENST00000374043 ATAD2BQ9ULI0 1458 aa17.14■□□□□ 0.33
PACSIN1-202ENST00000374043 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
PACSIN1-202ENST00000374043 CEP164Q9UPV0 1460 aa17.11■□□□□ 0.33
PACSIN1-202ENST00000374043 KANK4Q5T7N3 995 aaPredicted RBP17.09■□□□□ 0.33
PACSIN1-202ENST00000374043 TRIM52Q96A61 297 aa17.07■□□□□ 0.32
PACSIN1-202ENST00000374043 POLR3GLQ9BT43 218 aa17.06■□□□□ 0.32
PACSIN1-202ENST00000374043 ACIN1Q9UKV3 1341 aaKnown RBP17.04■□□□□ 0.32
PACSIN1-202ENST00000374043 SCAF1Q9H7N4 1312 aaKnown RBP17.03■□□□□ 0.32
PACSIN1-202ENST00000374043 RAPGEF2Q9Y4G8 1499 aa17.03■□□□□ 0.32
PACSIN1-202ENST00000374043 MIER1Q8N108 512 aa17.02■□□□□ 0.32
PACSIN1-202ENST00000374043 HIRIP3Q9BW71 556 aaPredicted RBP17.02■□□□□ 0.32
PACSIN1-202ENST00000374043 KIF27Q86VH2 1401 aa17.02■□□□□ 0.31
PACSIN1-202ENST00000374043 CHIC2Q9UKJ5 165 aa16.98■□□□□ 0.31
PACSIN1-202ENST00000374043 CUX2O14529 1486 aa16.96■□□□□ 0.31
PACSIN1-202ENST00000374043 VPS8Q8N3P4 1428 aa16.92■□□□□ 0.3
PACSIN1-202ENST00000374043 PELP1Q8IZL8 1130 aaKnown RBP16.91■□□□□ 0.3
PACSIN1-202ENST00000374043 ZNF777Q9ULD5 760 aaPredicted RBP16.89■□□□□ 0.29
PACSIN1-202ENST00000374043 CARMIL1Q5VZK9 1371 aa16.88■□□□□ 0.29
PACSIN1-202ENST00000374043 ZNF326Q5BKZ1 582 aaKnown RBP16.88■□□□□ 0.29
PACSIN1-202ENST00000374043 DDX10Q13206 875 aaKnown RBP16.87■□□□□ 0.29
PACSIN1-202ENST00000374043 BCANQ96GW7 911 aa16.86■□□□□ 0.29
PACSIN1-202ENST00000374043 SIN3AQ96ST3 1273 aa16.86■□□□□ 0.29
PACSIN1-202ENST00000374043 BICRAQ9NZM4 1560 aa16.86■□□□□ 0.29
PACSIN1-202ENST00000374043 TDRD9Q8NDG6 1382 aaKnown RBP16.83■□□□□ 0.28
PACSIN1-202ENST00000374043 SYNJ1O43426 1573 aa16.82■□□□□ 0.28
PACSIN1-202ENST00000374043 RRP7BPQ9NSQ0 103 aa16.82■□□□□ 0.28
PACSIN1-202ENST00000374043 MTUS2Q5JR59 1369 aa16.81■□□□□ 0.28
PACSIN1-202ENST00000374043 MYT1LQ9UL68 1186 aa16.8■□□□□ 0.28
PACSIN1-202ENST00000374043 CADPSQ9ULU8 1353 aa16.79■□□□□ 0.28
PACSIN1-202ENST00000374043 NEFLP07196 543 aa16.79■□□□□ 0.28
PACSIN1-202ENST00000374043 CCNB3Q8WWL7 1395 aa16.75■□□□□ 0.27
PACSIN1-202ENST00000374043 DNAJC5BQ9UF47 199 aa16.74■□□□□ 0.27
PACSIN1-202ENST00000374043 EIF4G1Q04637 1599 aaKnown RBP16.71■□□□□ 0.27
PACSIN1-202ENST00000374043 UNC13AQ9UPW8 1703 aa16.71■□□□□ 0.26
PACSIN1-202ENST00000374043 ANP32CO43423 234 aa16.69■□□□□ 0.26
PACSIN1-202ENST00000374043 TONSLQ96HA7 1378 aa16.69■□□□□ 0.26
PACSIN1-202ENST00000374043 CHMP7Q8WUX9 453 aaPredicted RBP16.68■□□□□ 0.26
PACSIN1-202ENST00000374043 NCAPD3P42695 1498 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms