RNA–Protein interactions for RNA: ENST00000624495.3

GDF9-207, Transcript of growth differentiation factor 9, humanhuman

TSL 2 BASIC

Gene GDF9, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-207ENST00000624495 NISCHQ9Y2I1 1504 aa25.58■■□□□ 1.69
GDF9-207ENST00000624495 CCDC180Q9P1Z9 1646 aa21.86■■□□□ 1.09
GDF9-207ENST00000624495 ZCCHC6Q5VYS8 1495 aaKnown RBP21.6■■□□□ 1.05
GDF9-207ENST00000624495 SHROOM4Q9ULL8 1493 aa21.5■■□□□ 1.03
GDF9-207ENST00000624495 DCAF8L2P0C7V8 631 aa21.13■□□□□ 0.97
GDF9-207ENST00000624495 DCAF1Q9Y4B6 1507 aa21.1■□□□□ 0.97
GDF9-207ENST00000624495 SUPT5HO00267 1087 aaKnown RBP21.07■□□□□ 0.96
GDF9-207ENST00000624495 MYO15BQ96JP2 1530 aa20.59■□□□□ 0.89
GDF9-207ENST00000624495 CHIC1Q5VXU3 224 aa20.48■□□□□ 0.87
GDF9-207ENST00000624495 SCRIBQ14160 1630 aa20.32■□□□□ 0.84
GDF9-207ENST00000624495 ABCC9O60706 1549 aa20.32■□□□□ 0.84
GDF9-207ENST00000624495 NACADO15069 1562 aa20.29■□□□□ 0.84
GDF9-207ENST00000624495 RSF1Q96T23 1441 aaPredicted RBP20.16■□□□□ 0.82
GDF9-207ENST00000624495 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
GDF9-207ENST00000624495 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
GDF9-207ENST00000624495 MROH2BQ7Z745 1585 aa19.8■□□□□ 0.76
GDF9-207ENST00000624495 LOC105371045A0A1W2PR82 267 aa19.77■□□□□ 0.76
GDF9-207ENST00000624495 TRIM41Q8WV44 630 aa19.74■□□□□ 0.75
GDF9-207ENST00000624495 BAZ1AQ9NRL2 1556 aaPredicted RBP19.69■□□□□ 0.74
GDF9-207ENST00000624495 WIZO95785 1651 aa19.65■□□□□ 0.74
GDF9-207ENST00000624495 PCGF6Q9BYE7 350 aa19.62■□□□□ 0.73
GDF9-207ENST00000624495 HRCP23327 699 aa19.59■□□□□ 0.73
GDF9-207ENST00000624495 SMARCA4P51532 1647 aa19.48■□□□□ 0.71
GDF9-207ENST00000624495 UNC13AQ9UPW8 1703 aa19.46■□□□□ 0.71
GDF9-207ENST00000624495 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
GDF9-207ENST00000624495 FAM9AQ8IZU1 332 aaPredicted RBP19.44■□□□□ 0.7
GDF9-207ENST00000624495 TRIM26Q12899 539 aaPredicted RBP19.42■□□□□ 0.7
GDF9-207ENST00000624495 EIF4G1Q04637 1599 aaKnown RBP19.35■□□□□ 0.69
GDF9-207ENST00000624495 CCDC88BA6NC98 1476 aa19.33■□□□□ 0.68
GDF9-207ENST00000624495 PABPN1Q86U42 306 aaKnown RBP eCLIP19.32■□□□□ 0.68
GDF9-207ENST00000624495 BICRAQ9NZM4 1560 aa19.31■□□□□ 0.68
GDF9-207ENST00000624495 SMARCA2P51531 1590 aa19.29■□□□□ 0.68
GDF9-207ENST00000624495 PEG3Q9GZU2 1588 aa19.18■□□□□ 0.66
GDF9-207ENST00000624495 EHMT2Q96KQ7 1210 aa19.17■□□□□ 0.66
GDF9-207ENST00000624495 ABCC8Q09428 1581 aa19.12■□□□□ 0.65
GDF9-207ENST00000624495 AEBP2Q6ZN18 517 aaPredicted RBP19.07■□□□□ 0.64
GDF9-207ENST00000624495 EEA1Q15075 1411 aa19.05■□□□□ 0.64
GDF9-207ENST00000624495 ATAD2BQ9ULI0 1458 aa19.04■□□□□ 0.64
GDF9-207ENST00000624495 ZEB1P37275 1124 aaPredicted RBP19.03■□□□□ 0.64
GDF9-207ENST00000624495 PPARGC1BQ86YN6 1023 aaKnown RBP19.02■□□□□ 0.64
GDF9-207ENST00000624495 BAZ1BQ9UIG0 1483 aaKnown RBP18.99■□□□□ 0.63
GDF9-207ENST00000624495 SOGA1O94964 1423 aa18.97■□□□□ 0.63
GDF9-207ENST00000624495 WRNQ14191 1432 aaPredicted RBP eCLIP18.96■□□□□ 0.63
GDF9-207ENST00000624495 CSRNP3Q8WYN3 585 aa18.96■□□□□ 0.63
GDF9-207ENST00000624495 TNIKQ9UKE5 1360 aa18.92■□□□□ 0.62
GDF9-207ENST00000624495 CEP162Q5TB80 1403 aa18.86■□□□□ 0.61
GDF9-207ENST00000624495 UBTFP17480 764 aaKnown RBP18.83■□□□□ 0.6
GDF9-207ENST00000624495 RUSC2Q8N2Y8 1516 aa18.82■□□□□ 0.6
GDF9-207ENST00000624495 GOLGA3Q08378 1498 aa18.81■□□□□ 0.6
GDF9-207ENST00000624495 SYNJ1O43426 1573 aa18.79■□□□□ 0.6
GDF9-207ENST00000624495 NCAPD3P42695 1498 aa18.76■□□□□ 0.59
GDF9-207ENST00000624495 CEP164Q9UPV0 1460 aa18.74■□□□□ 0.59
GDF9-207ENST00000624495 HMGXB3Q12766 1538 aa18.74■□□□□ 0.59
GDF9-207ENST00000624495 KIF21BO75037 1637 aa18.68■□□□□ 0.58
GDF9-207ENST00000624495 TOP2BQ02880 1626 aa18.65■□□□□ 0.58
GDF9-207ENST00000624495 CLIP1P30622 1438 aa18.57■□□□□ 0.56
GDF9-207ENST00000624495 BIVM-ERCC5R4GMW8 1640 aa18.57■□□□□ 0.56
GDF9-207ENST00000624495 CCER1Q8TC90 406 aaPredicted RBP18.57■□□□□ 0.56
GDF9-207ENST00000624495 CFTRP13569 1480 aa18.54■□□□□ 0.56
GDF9-207ENST00000624495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.54■□□□□ 0.56
GDF9-207ENST00000624495 TTBK1Q5TCY1 1321 aaPredicted RBP18.53■□□□□ 0.56
GDF9-207ENST00000624495 RAPGEF2Q9Y4G8 1499 aa18.53■□□□□ 0.56
GDF9-207ENST00000624495 VPS8Q8N3P4 1428 aa18.48■□□□□ 0.55
GDF9-207ENST00000624495 CUX1P39880 1505 aa18.46■□□□□ 0.55
GDF9-207ENST00000624495 ERICH3Q5RHP9 1530 aa18.46■□□□□ 0.54
GDF9-207ENST00000624495 APLP2Q06481 763 aa18.45■□□□□ 0.54
GDF9-207ENST00000624495 PRXQ9BXM0 1461 aa18.44■□□□□ 0.54
GDF9-207ENST00000624495 KIF27Q86VH2 1401 aa18.44■□□□□ 0.54
GDF9-207ENST00000624495 CADPSQ9ULU8 1353 aa18.38■□□□□ 0.53
GDF9-207ENST00000624495 RANGAP1P46060 587 aaPredicted RBP18.35■□□□□ 0.53
GDF9-207ENST00000624495 PRDM2Q13029 1718 aa18.31■□□□□ 0.52
GDF9-207ENST00000624495 CC2D2AQ9P2K1 1620 aa18.25■□□□□ 0.51
GDF9-207ENST00000624495 ARAP1Q96P48 1450 aa18.24■□□□□ 0.51
GDF9-207ENST00000624495 HNRNPUL2Q1KMD3 747 aaKnown RBP18.24■□□□□ 0.51
GDF9-207ENST00000624495 CUX2O14529 1486 aa18.22■□□□□ 0.51
GDF9-207ENST00000624495 IGF1RP08069 1367 aa18.21■□□□□ 0.51
GDF9-207ENST00000624495 FGD5Q6ZNL6 1462 aa18.17■□□□□ 0.5
GDF9-207ENST00000624495 FANCD2Q9BXW9 1451 aa18.16■□□□□ 0.5
GDF9-207ENST00000624495 CARMIL1Q5VZK9 1371 aa18.14■□□□□ 0.5
GDF9-207ENST00000624495 ARHGAP35Q9NRY4 1499 aa18.12■□□□□ 0.49
GDF9-207ENST00000624495 DIEXFQ68CQ4 756 aaKnown RBP18.11■□□□□ 0.49
GDF9-207ENST00000624495 KANK4Q5T7N3 995 aaPredicted RBP18.09■□□□□ 0.49
GDF9-207ENST00000624495 DNMBPQ6XZF7 1577 aa18.06■□□□□ 0.48
GDF9-207ENST00000624495 ZNF316A6NFI3 1004 aaPredicted RBP18.06■□□□□ 0.48
GDF9-207ENST00000624495 RRBP1Q9P2E9 1410 aaKnown RBP18.03■□□□□ 0.48
GDF9-207ENST00000624495 CLSPNQ9HAW4 1339 aa18.03■□□□□ 0.48
GDF9-207ENST00000624495 ABCA10Q8WWZ4 1543 aa18.02■□□□□ 0.47
GDF9-207ENST00000624495 TOPBP1Q92547 1522 aa18.01■□□□□ 0.47
GDF9-207ENST00000624495 MAP3K1Q13233 1512 aa18■□□□□ 0.47
GDF9-207ENST00000624495 POLA1P09884 1462 aaPredicted RBP17.98■□□□□ 0.47
GDF9-207ENST00000624495 CCNB3Q8WWL7 1395 aa17.97■□□□□ 0.47
GDF9-207ENST00000624495 NESP48681 1621 aa17.97■□□□□ 0.47
GDF9-207ENST00000624495 FHAD1B1AJZ9 1412 aa17.96■□□□□ 0.47
GDF9-207ENST00000624495 RAD54L2Q9Y4B4 1467 aa17.96■□□□□ 0.47
GDF9-207ENST00000624495 LAMC3Q9Y6N6 1575 aa17.96■□□□□ 0.47
GDF9-207ENST00000624495 DHX57Q6P158 1386 aaKnown RBP17.91■□□□□ 0.46
GDF9-207ENST00000624495 TIAM1Q13009 1591 aa17.91■□□□□ 0.46
GDF9-207ENST00000624495 PDS5BQ9NTI5 1447 aa17.9■□□□□ 0.46
GDF9-207ENST00000624495 CUL7Q14999 1698 aa17.89■□□□□ 0.45
GDF9-207ENST00000624495 LRRC9Q6ZRR7 1453 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms