Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ALKBH8-204ENST00000417449 2114 ntAPPRIS ALT1 TSL 2 BASIC10.79□□□□□ -0.68
P04436 ZBTB44-205ENST00000525842 9315 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04436 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04436 SPP1-203ENST00000395080 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04436 ZFAT-208ENST00000520356 4273 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P04436 ACSBG1-214ENST00000560817 2462 ntTSL 5 BASIC10.79□□□□□ -0.68
P04436 ZMAT3-201ENST00000311417 9406 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04436 MEMO1-207ENST00000426310 1336 ntTSL 2 BASIC10.79□□□□□ -0.68
P04436 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04436 ST5-230ENST00000530438 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04436 ADGRE2-204ENST00000392965 2513 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
P04436 PPP1R12A-203ENST00000450142 5721 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P04436 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P04436 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC10.79□□□□□ -0.68
P04436 CXorf56-201ENST00000320339 2372 ntTSL 2 BASIC10.79□□□□□ -0.68
P04436 ALAS1-201ENST00000310271 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 PDIA6-204ENST00000404824 2236 ntTSL 2 BASIC10.78□□□□□ -0.68
P04436 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 FER1L6-AS2-201ENST00000520031 1746 ntTSL 2 BASIC10.78□□□□□ -0.68
P04436 RPAP1-201ENST00000304330 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 SYN3-202ENST00000358763 3126 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
P04436 YPEL2-201ENST00000312655 5217 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC10.78□□□□□ -0.68
P04436 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 CNN2-207ENST00000565096 2109 ntTSL 2 BASIC10.78□□□□□ -0.68
P04436 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 LAMA4-219ENST00000522006 6438 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC10.78□□□□□ -0.68
P04436 PLAGL2-201ENST00000246229 5705 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 PSMD1-202ENST00000373635 3230 ntTSL 5 BASIC10.78□□□□□ -0.68
P04436 UHRF1-206ENST00000622802 3230 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 VPS4A-201ENST00000254950 4100 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 NAT10-202ENST00000527971 1600 ntTSL 2 BASIC10.78□□□□□ -0.68
P04436 SYPL2-201ENST00000369872 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 POLR2M-201ENST00000299638 4199 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 IFNA6-201ENST00000259555 704 ntBASIC10.78□□□□□ -0.68
P04436 TPM3-202ENST00000302206 741 ntTSL 3 BASIC10.78□□□□□ -0.68
P04436 UQCRH-201ENST00000311672 604 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 OR6N1-201ENST00000335094 1027 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
P04436 CD79B-202ENST00000349817 378 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 CXorf40B-201ENST00000355203 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 HNRNPA1P46-201ENST00000411735 937 ntBASIC10.78□□□□□ -0.68
P04436 AC097523.1-201ENST00000429515 637 ntBASIC10.78□□□□□ -0.68
P04436 AL356056.2-202ENST00000430188 553 ntTSL 2 BASIC10.78□□□□□ -0.68
P04436 AC253536.1-201ENST00000437021 315 ntBASIC10.78□□□□□ -0.68
P04436 AC073370.1-201ENST00000441348 525 ntTSL 3 BASIC10.78□□□□□ -0.68
P04436 BX284656.1-201ENST00000446364 668 ntTSL 3 BASIC10.78□□□□□ -0.68
P04436 AL359504.1-201ENST00000448052 493 ntBASIC10.78□□□□□ -0.68
P04436 AC022540.1-201ENST00000448214 965 ntTSL 5 BASIC10.78□□□□□ -0.68
P04436 AC008937.1-201ENST00000453721 914 ntTSL 3 BASIC10.78□□□□□ -0.68
P04436 AC096637.1-201ENST00000458662 174 ntTSL 5 BASIC10.78□□□□□ -0.68
P04436 LAIR1-217ENST00000474878 814 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC10.78□□□□□ -0.68
P04436 PSMA4-219ENST00000560217 944 ntTSL 5 BASIC10.78□□□□□ -0.68
P04436 AC087463.4-201ENST00000561964 448 ntTSL 5 BASIC10.78□□□□□ -0.68
P04436 AP001793.1-201ENST00000584733 839 ntBASIC10.78□□□□□ -0.68
P04436 AL360272.1-201ENST00000605501 585 ntBASIC10.78□□□□□ -0.68
P04436 MIR6750-201ENST00000617817 75 ntBASIC10.78□□□□□ -0.68
P04436 PSMB3-211ENST00000619426 773 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 AC008966.1-201ENST00000502171 2367 ntTSL 2 BASIC10.78□□□□□ -0.68
P04436 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 FBXO39-201ENST00000321535 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 HSPA14-202ENST00000437161 1689 ntTSL 2 BASIC10.78□□□□□ -0.68
P04436 ERBB2-218ENST00000584450 3730 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 COL5A2-201ENST00000374866 6949 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 ELMO2-204ENST00000396391 3574 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 MYH4-201ENST00000255381 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC10.78□□□□□ -0.68
P04436 PDXK-209ENST00000467908 7194 ntTSL 3 BASIC10.78□□□□□ -0.68
P04436 RASGRP4-207ENST00000587738 2293 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
P04436 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC10.78□□□□□ -0.68
P04436 HIST1H2BG-201ENST00000541790 1534 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
P04436 AC016355.1-201ENST00000604760 1533 ntBASIC10.78□□□□□ -0.68
P04436 MPP2-220ENST00000622681 4242 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
P04436 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P04436 MAGEB17-201ENST00000400003 1379 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
P04436 PRL-203ENST00000617911 1364 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
P04436 GPR12-201ENST00000381436 1981 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
P04436 AL132642.2-201ENST00000623423 1998 ntBASIC10.77□□□□□ -0.68
P04436 HSPA8-201ENST00000227378 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P04436 AC009264.1-205ENST00000439694 2160 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
P04436 EDNRA-202ENST00000358556 3823 ntTSL 5 BASIC10.77□□□□□ -0.68
P04436 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
P04436 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P04436 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
P04436 PRDM7-202ENST00000449207 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P04436 FETUB-201ENST00000265029 1627 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P04436 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
P04436 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC10.77□□□□□ -0.68
P04436 GPRASP2-205ENST00000543253 3935 ntAPPRIS P1 TSL 4 BASIC10.77□□□□□ -0.69
P04436 DPP3P1-201ENST00000508984 2063 ntBASIC10.77□□□□□ -0.69
P04436 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P04436 RAP1GAP-201ENST00000290101 3584 ntTSL 5 BASIC10.77□□□□□ -0.69
P04436 FAM47A-202ENST00000613251 2518 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
P04436 RAB37-212ENST00000528438 1494 ntTSL 2 BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms