RNA–Protein interactions for RNA: ENST00000558372.1

AC022087.1-201, humanhuman

TSL 3 BASIC

Gene AC022087.1, Length 612 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC022087.1-201ENST00000558372 AEBP2Q6ZN18 517 aaPredicted RBP36.52■■■■□ 3.44
AC022087.1-201ENST00000558372 CHIC1Q5VXU3 224 aa35.3■■■■□ 3.24
AC022087.1-201ENST00000558372 PHF23Q9BUL5 403 aaPredicted RBP31.1■■■□□ 2.57
AC022087.1-201ENST00000558372 SENP3Q9H4L4 574 aaPredicted RBP30.87■■■□□ 2.53
AC022087.1-201ENST00000558372 FOXD1Q16676 465 aa28.79■■■□□ 2.2
AC022087.1-201ENST00000558372 PLPPR3Q6T4P5 718 aa28.48■■■□□ 2.15
AC022087.1-201ENST00000558372 NISCHQ9Y2I1 1504 aa28.18■■■□□ 2.1
AC022087.1-201ENST00000558372 PPP6R1Q9UPN7 881 aa27.55■■■□□ 2
AC022087.1-201ENST00000558372 ADRA2BP18089 450 aa27.47■■□□□ 1.99
AC022087.1-201ENST00000558372 PIAS4Q8N2W9 510 aaPredicted RBP27.02■■□□□ 1.92
AC022087.1-201ENST00000558372 MSH5O43196 834 aa26.52■■□□□ 1.84
AC022087.1-201ENST00000558372 PPP4R3CPQ6ZMV5 832 aa25.11■■□□□ 1.61
AC022087.1-201ENST00000558372 MAPK8IP2Q13387 824 aaPredicted RBP25.03■■□□□ 1.6
AC022087.1-201ENST00000558372 CCDC180Q9P1Z9 1646 aa24.97■■□□□ 1.59
AC022087.1-201ENST00000558372 SCAF1Q9H7N4 1312 aaKnown RBP24.94■■□□□ 1.58
AC022087.1-201ENST00000558372 POTEDQ86YR6 584 aa24.74■■□□□ 1.55
AC022087.1-201ENST00000558372 DMRT2Q9Y5R5 561 aa24.64■■□□□ 1.54
AC022087.1-201ENST00000558372 CNKSR2Q8WXI2 1034 aa24.42■■□□□ 1.5
AC022087.1-201ENST00000558372 KCNA4P22459 653 aa24.28■■□□□ 1.48
AC022087.1-201ENST00000558372 NCBP3Q53F19 620 aaKnown RBP24.26■■□□□ 1.47
AC022087.1-201ENST00000558372 ABCC9O60706 1549 aa24.15■■□□□ 1.46
AC022087.1-201ENST00000558372 NPM3O75607 178 aaKnown RBP24.05■■□□□ 1.44
AC022087.1-201ENST00000558372 HOXD11P31277 338 aaPredicted RBP24.03■■□□□ 1.44
AC022087.1-201ENST00000558372 RNF216Q9NWF9 866 aaPredicted RBP24.02■■□□□ 1.44
AC022087.1-201ENST00000558372 DCAF8L1A6NGE4 600 aa23.56■■□□□ 1.36
AC022087.1-201ENST00000558372 ZCCHC6Q5VYS8 1495 aaKnown RBP23.56■■□□□ 1.36
AC022087.1-201ENST00000558372 NACADO15069 1562 aa23.39■■□□□ 1.33
AC022087.1-201ENST00000558372 DCAF8L2P0C7V8 631 aa23.36■■□□□ 1.33
AC022087.1-201ENST00000558372 RB1CC1Q8TDY2 1594 aa23.35■■□□□ 1.33
AC022087.1-201ENST00000558372 MYO15BQ96JP2 1530 aa23.33■■□□□ 1.33
AC022087.1-201ENST00000558372 DCAF1Q9Y4B6 1507 aa23.33■■□□□ 1.33
AC022087.1-201ENST00000558372 DNAJC5BQ9UF47 199 aa23.33■■□□□ 1.33
AC022087.1-201ENST00000558372 SLC4A1APQ9BWU0 796 aaKnown RBP23■■□□□ 1.27
AC022087.1-201ENST00000558372 UNC13AQ9UPW8 1703 aa22.88■■□□□ 1.25
AC022087.1-201ENST00000558372 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.84■■□□□ 1.25
AC022087.1-201ENST00000558372 SLC4A2P04920 1241 aa22.82■■□□□ 1.24
AC022087.1-201ENST00000558372 SCRIBQ14160 1630 aa22.8■■□□□ 1.24
AC022087.1-201ENST00000558372 RNF39Q9H2S5 420 aa22.79■■□□□ 1.24
AC022087.1-201ENST00000558372 BICRAQ9NZM4 1560 aa22.66■■□□□ 1.22
AC022087.1-201ENST00000558372 PABPN1Q86U42 306 aaKnown RBP eCLIP22.58■■□□□ 1.21
AC022087.1-201ENST00000558372 U3KPZ7 1027 aaPredicted RBP22.54■■□□□ 1.2
AC022087.1-201ENST00000558372 SHROOM4Q9ULL8 1493 aa22.42■■□□□ 1.18
AC022087.1-201ENST00000558372 C1QBPQ07021 282 aaKnown RBP22.42■■□□□ 1.18
AC022087.1-201ENST00000558372 ZBTB22O15209 634 aa22.41■■□□□ 1.18
AC022087.1-201ENST00000558372 CACNB1Q02641 598 aaPredicted RBP22.34■■□□□ 1.17
AC022087.1-201ENST00000558372 FOXD4L1Q9NU39 408 aa22.34■■□□□ 1.17
AC022087.1-201ENST00000558372 MYCNP04198 464 aaPredicted RBP22.15■■□□□ 1.14
AC022087.1-201ENST00000558372 EHMT2Q96KQ7 1210 aa22.09■■□□□ 1.13
AC022087.1-201ENST00000558372 EIF4G1Q04637 1599 aaKnown RBP22.03■■□□□ 1.12
AC022087.1-201ENST00000558372 SPINK5Q9NQ38 1064 aaPredicted RBP22.02■■□□□ 1.12
AC022087.1-201ENST00000558372 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.99■■□□□ 1.11
AC022087.1-201ENST00000558372 HNRNPUL2Q1KMD3 747 aaKnown RBP21.99■■□□□ 1.11
AC022087.1-201ENST00000558372 CSRNP3Q8WYN3 585 aa21.99■■□□□ 1.11
AC022087.1-201ENST00000558372 SAMD1Q6SPF0 538 aaPredicted RBP21.94■■□□□ 1.1
AC022087.1-201ENST00000558372 CECR2Q9BXF3 1484 aa21.93■■□□□ 1.1
AC022087.1-201ENST00000558372 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
AC022087.1-201ENST00000558372 CAPN15O75808 1086 aa21.85■■□□□ 1.09
AC022087.1-201ENST00000558372 SMARCA4P51532 1647 aa21.84■■□□□ 1.09
AC022087.1-201ENST00000558372 BAZ1AQ9NRL2 1556 aaPredicted RBP21.82■■□□□ 1.08
AC022087.1-201ENST00000558372 APLP2Q06481 763 aa21.77■■□□□ 1.08
AC022087.1-201ENST00000558372 MROH2BQ7Z745 1585 aa21.74■■□□□ 1.07
AC022087.1-201ENST00000558372 ATF5Q9Y2D1 282 aaPredicted RBP21.73■■□□□ 1.07
AC022087.1-201ENST00000558372 TRHP20396 242 aaPredicted RBP21.7■■□□□ 1.06
AC022087.1-201ENST00000558372 ZNF219Q9P2Y4 722 aaPredicted RBP21.63■■□□□ 1.05
AC022087.1-201ENST00000558372 ATAD2BQ9ULI0 1458 aa21.62■■□□□ 1.05
AC022087.1-201ENST00000558372 SMARCA2P51531 1590 aa21.61■■□□□ 1.05
AC022087.1-201ENST00000558372 PEG3Q9GZU2 1588 aa21.61■■□□□ 1.05
AC022087.1-201ENST00000558372 DSG3P32926 999 aa21.6■■□□□ 1.05
AC022087.1-201ENST00000558372 RSF1Q96T23 1441 aaPredicted RBP21.57■■□□□ 1.04
AC022087.1-201ENST00000558372 NCAPD3P42695 1498 aa21.57■■□□□ 1.04
AC022087.1-201ENST00000558372 ATXN8OSP0DMR3 200 aa21.54■■□□□ 1.04
AC022087.1-201ENST00000558372 WIZO95785 1651 aa21.53■■□□□ 1.04
AC022087.1-201ENST00000558372 HMGXB3Q12766 1538 aa21.51■■□□□ 1.03
AC022087.1-201ENST00000558372 ABCB7O75027 752 aa21.47■■□□□ 1.03
AC022087.1-201ENST00000558372 BAZ1BQ9UIG0 1483 aaKnown RBP21.46■■□□□ 1.03
AC022087.1-201ENST00000558372 TOP2AP11388 1531 aaKnown RBP21.31■■□□□ 1
AC022087.1-201ENST00000558372 POLA2Q14181 598 aa21.29■■□□□ 1
AC022087.1-201ENST00000558372 SUPT5HO00267 1087 aaKnown RBP21.17■□□□□ 0.98
AC022087.1-201ENST00000558372 CCDC88BA6NC98 1476 aa21.03■□□□□ 0.96
AC022087.1-201ENST00000558372 NESP48681 1621 aa20.99■□□□□ 0.95
AC022087.1-201ENST00000558372 LAMC3Q9Y6N6 1575 aa20.97■□□□□ 0.95
AC022087.1-201ENST00000558372 CADPSQ9ULU8 1353 aa20.94■□□□□ 0.94
AC022087.1-201ENST00000558372 CFTRP13569 1480 aa20.89■□□□□ 0.94
AC022087.1-201ENST00000558372 PRDM2Q13029 1718 aa20.81■□□□□ 0.92
AC022087.1-201ENST00000558372 ZBTB12Q9Y330 459 aaPredicted RBP20.8■□□□□ 0.92
AC022087.1-201ENST00000558372 PDS5BQ9NTI5 1447 aa20.78■□□□□ 0.92
AC022087.1-201ENST00000558372 KIF21AQ7Z4S6 1674 aa20.78■□□□□ 0.92
AC022087.1-201ENST00000558372 ERCC6Q03468 1493 aa20.78■□□□□ 0.92
AC022087.1-201ENST00000558372 MKRN4PQ13434 485 aaPredicted RBP20.75■□□□□ 0.91
AC022087.1-201ENST00000558372 FANCD2Q9BXW9 1451 aa20.71■□□□□ 0.91
AC022087.1-201ENST00000558372 CEP164Q9UPV0 1460 aa20.67■□□□□ 0.9
AC022087.1-201ENST00000558372 FBLN2P98095 1184 aa20.64■□□□□ 0.89
AC022087.1-201ENST00000558372 THOC2Q8NI27 1593 aaKnown RBP20.63■□□□□ 0.89
AC022087.1-201ENST00000558372 OSCARQ8IYS5 282 aa20.62■□□□□ 0.89
AC022087.1-201ENST00000558372 MRC2Q9UBG0 1479 aa20.59■□□□□ 0.89
AC022087.1-201ENST00000558372 WDR62O43379 1518 aa20.53■□□□□ 0.88
AC022087.1-201ENST00000558372 URB2Q14146 1524 aaKnown RBP20.51■□□□□ 0.87
AC022087.1-201ENST00000558372 CUX2O14529 1486 aa20.48■□□□□ 0.87
AC022087.1-201ENST00000558372 RBM42Q9BTD8 480 aaKnown RBP20.47■□□□□ 0.87
AC022087.1-201ENST00000558372 DNMBPQ6XZF7 1577 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms