Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SLC52A1Q9NWF4 MKRN4P-201ENST00000444706 1521 ntBASIC31.13■■■□□ 2.57
SLC52A1Q9NWF4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SLC52A1Q9NWF4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SLC52A1Q9NWF4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC31.12■■■□□ 2.57
SLC52A1Q9NWF4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC31.12■■■□□ 2.57
SLC52A1Q9NWF4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SLC52A1Q9NWF4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC31.12■■■□□ 2.57
SLC52A1Q9NWF4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
SLC52A1Q9NWF4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
SLC52A1Q9NWF4 AC092118.2-201ENST00000613495 667 ntBASIC31.12■■■□□ 2.57
SLC52A1Q9NWF4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SLC52A1Q9NWF4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC31.12■■■□□ 2.57
SLC52A1Q9NWF4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC31.12■■■□□ 2.57
SLC52A1Q9NWF4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SLC52A1Q9NWF4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SLC52A1Q9NWF4 ANOS2P-203ENST00000472227 1816 ntBASIC31.12■■■□□ 2.57
SLC52A1Q9NWF4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SLC52A1Q9NWF4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
SLC52A1Q9NWF4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
SLC52A1Q9NWF4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
SLC52A1Q9NWF4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SLC52A1Q9NWF4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC31.11■■■□□ 2.57
SLC52A1Q9NWF4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC31.11■■■□□ 2.57
SLC52A1Q9NWF4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SLC52A1Q9NWF4 AC093827.2-201ENST00000512654 315 ntBASIC31.11■■■□□ 2.57
SLC52A1Q9NWF4 DET1-205ENST00000558413 583 ntTSL 4 BASIC31.11■■■□□ 2.57
SLC52A1Q9NWF4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SLC52A1Q9NWF4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
SLC52A1Q9NWF4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SLC52A1Q9NWF4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC31.1■■■□□ 2.57
SLC52A1Q9NWF4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SLC52A1Q9NWF4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC31.1■■■□□ 2.57
SLC52A1Q9NWF4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SLC52A1Q9NWF4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SLC52A1Q9NWF4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC31.1■■■□□ 2.57
SLC52A1Q9NWF4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SLC52A1Q9NWF4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SLC52A1Q9NWF4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
SLC52A1Q9NWF4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC31.1■■■□□ 2.57
SLC52A1Q9NWF4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC31.1■■■□□ 2.57
SLC52A1Q9NWF4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
SLC52A1Q9NWF4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC31.09■■■□□ 2.57
SLC52A1Q9NWF4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SLC52A1Q9NWF4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC31.09■■■□□ 2.57
SLC52A1Q9NWF4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
SLC52A1Q9NWF4 OR7E47P-201ENST00000546390 1422 ntBASIC31.08■■■□□ 2.57
SLC52A1Q9NWF4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SLC52A1Q9NWF4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC31.08■■■□□ 2.57
SLC52A1Q9NWF4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC31.08■■■□□ 2.57
SLC52A1Q9NWF4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC31.08■■■□□ 2.57
SLC52A1Q9NWF4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SLC52A1Q9NWF4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC31.08■■■□□ 2.57
SLC52A1Q9NWF4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SLC52A1Q9NWF4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SLC52A1Q9NWF4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SLC52A1Q9NWF4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SLC52A1Q9NWF4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC31.07■■■□□ 2.56
SLC52A1Q9NWF4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SLC52A1Q9NWF4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SLC52A1Q9NWF4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SLC52A1Q9NWF4 RNA5SP413-201ENST00000516373 109 ntBASIC31.07■■■□□ 2.56
SLC52A1Q9NWF4 LINC00526-201ENST00000581067 1875 ntBASIC31.07■■■□□ 2.56
SLC52A1Q9NWF4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SLC52A1Q9NWF4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SLC52A1Q9NWF4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SLC52A1Q9NWF4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC31.06■■■□□ 2.56
SLC52A1Q9NWF4 PRORSD1P-201ENST00000295112 541 ntBASIC31.06■■■□□ 2.56
SLC52A1Q9NWF4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC31.06■■■□□ 2.56
SLC52A1Q9NWF4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC31.06■■■□□ 2.56
SLC52A1Q9NWF4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC31.06■■■□□ 2.56
SLC52A1Q9NWF4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC31.06■■■□□ 2.56
SLC52A1Q9NWF4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
SLC52A1Q9NWF4 AP006587.3-201ENST00000525742 1516 ntBASIC31.05■■■□□ 2.56
SLC52A1Q9NWF4 KRT18P29-201ENST00000397031 1267 ntBASIC31.05■■■□□ 2.56
SLC52A1Q9NWF4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
SLC52A1Q9NWF4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC31.05■■■□□ 2.56
SLC52A1Q9NWF4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC31.05■■■□□ 2.56
SLC52A1Q9NWF4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC31.05■■■□□ 2.56
SLC52A1Q9NWF4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC31.05■■■□□ 2.56
SLC52A1Q9NWF4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC31.05■■■□□ 2.56
SLC52A1Q9NWF4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC31.04■■■□□ 2.56
SLC52A1Q9NWF4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SLC52A1Q9NWF4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
SLC52A1Q9NWF4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SLC52A1Q9NWF4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SLC52A1Q9NWF4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC31.04■■■□□ 2.56
SLC52A1Q9NWF4 AC093787.1-201ENST00000450396 207 ntBASIC31.04■■■□□ 2.56
SLC52A1Q9NWF4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC31.04■■■□□ 2.56
SLC52A1Q9NWF4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SLC52A1Q9NWF4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC31.04■■■□□ 2.56
SLC52A1Q9NWF4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
SLC52A1Q9NWF4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC31.04■■■□□ 2.56
SLC52A1Q9NWF4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC31.04■■■□□ 2.56
SLC52A1Q9NWF4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SLC52A1Q9NWF4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
SLC52A1Q9NWF4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
SLC52A1Q9NWF4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SLC52A1Q9NWF4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC31.03■■■□□ 2.56
SLC52A1Q9NWF4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC31.03■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms