Protein–RNA interactions for Protein: Q9H322

VCX2, Variable charge X-linked protein 2, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX2Q9H322 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC15.18■□□□□ 0.02
VCX2Q9H322 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.18■□□□□ 0.02
VCX2Q9H322 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC15.18■□□□□ 0.02
VCX2Q9H322 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
VCX2Q9H322 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
VCX2Q9H322 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
VCX2Q9H322 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VCX2Q9H322 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VCX2Q9H322 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.18■□□□□ 0.02
VCX2Q9H322 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VCX2Q9H322 RNF126P1-201ENST00000567452 1320 ntBASIC15.17■□□□□ 0.02
VCX2Q9H322 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VCX2Q9H322 LINC01529-204ENST00000636474 1715 ntBASIC15.17■□□□□ 0.02
VCX2Q9H322 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VCX2Q9H322 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VCX2Q9H322 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VCX2Q9H322 AC007952.6-201ENST00000573168 2673 ntBASIC15.17■□□□□ 0.02
VCX2Q9H322 AC003957.1-201ENST00000625108 2673 ntBASIC15.17■□□□□ 0.02
VCX2Q9H322 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VCX2Q9H322 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.17■□□□□ 0.02
VCX2Q9H322 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
VCX2Q9H322 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VCX2Q9H322 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC15.17■□□□□ 0.02
VCX2Q9H322 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VCX2Q9H322 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VCX2Q9H322 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VCX2Q9H322 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
VCX2Q9H322 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
VCX2Q9H322 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VCX2Q9H322 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VCX2Q9H322 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VCX2Q9H322 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VCX2Q9H322 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC15.17■□□□□ 0.02
VCX2Q9H322 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.17■□□□□ 0.02
VCX2Q9H322 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.17■□□□□ 0.02
VCX2Q9H322 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VCX2Q9H322 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VCX2Q9H322 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
VCX2Q9H322 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VCX2Q9H322 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VCX2Q9H322 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VCX2Q9H322 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.16■□□□□ 0.02
VCX2Q9H322 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.16■□□□□ 0.02
VCX2Q9H322 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.16■□□□□ 0.02
VCX2Q9H322 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.16■□□□□ 0.02
VCX2Q9H322 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VCX2Q9H322 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
VCX2Q9H322 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VCX2Q9H322 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC15.16■□□□□ 0.02
VCX2Q9H322 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC15.16■□□□□ 0.02
VCX2Q9H322 AC019171.1-201ENST00000601251 1056 ntBASIC15.16■□□□□ 0.02
VCX2Q9H322 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VCX2Q9H322 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.16■□□□□ 0.02
VCX2Q9H322 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VCX2Q9H322 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VCX2Q9H322 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VCX2Q9H322 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.16■□□□□ 0.02
VCX2Q9H322 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
VCX2Q9H322 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VCX2Q9H322 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
VCX2Q9H322 HYI-213ENST00000583037 1322 ntTSL 5 BASIC15.16■□□□□ 0.02
VCX2Q9H322 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCX2Q9H322 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCX2Q9H322 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCX2Q9H322 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
VCX2Q9H322 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCX2Q9H322 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC15.15■□□□□ 0.02
VCX2Q9H322 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC15.15■□□□□ 0.02
VCX2Q9H322 MTX2-204ENST00000443241 799 ntTSL 3 BASIC15.15■□□□□ 0.02
VCX2Q9H322 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VCX2Q9H322 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.15■□□□□ 0.02
VCX2Q9H322 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCX2Q9H322 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VCX2Q9H322 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCX2Q9H322 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCX2Q9H322 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCX2Q9H322 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCX2Q9H322 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.15■□□□□ 0.02
VCX2Q9H322 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCX2Q9H322 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
VCX2Q9H322 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
VCX2Q9H322 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.14■□□□□ 0.01
VCX2Q9H322 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
VCX2Q9H322 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.14■□□□□ 0.01
VCX2Q9H322 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.14■□□□□ 0.01
VCX2Q9H322 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.14■□□□□ 0.01
VCX2Q9H322 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
VCX2Q9H322 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.14■□□□□ 0.01
VCX2Q9H322 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.14■□□□□ 0.01
VCX2Q9H322 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
VCX2Q9H322 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VCX2Q9H322 AC120024.1-201ENST00000562672 995 ntBASIC15.14■□□□□ 0.01
VCX2Q9H322 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
VCX2Q9H322 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
VCX2Q9H322 AF131216.4-201ENST00000638924 1588 ntBASIC15.14■□□□□ 0.01
VCX2Q9H322 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VCX2Q9H322 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VCX2Q9H322 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VCX2Q9H322 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VCX2Q9H322 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms