Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC168Q8NDH2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC168Q8NDH2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CCDC168Q8NDH2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC168Q8NDH2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC168Q8NDH2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC168Q8NDH2 AC010141.3-201ENST00000456659 717 ntBASIC18.14■□□□□ 0.5
CCDC168Q8NDH2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.14■□□□□ 0.5
CCDC168Q8NDH2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC168Q8NDH2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC168Q8NDH2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC168Q8NDH2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC168Q8NDH2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC168Q8NDH2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CCDC168Q8NDH2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC168Q8NDH2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC168Q8NDH2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC168Q8NDH2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
CCDC168Q8NDH2 DUSP8P5-201ENST00000422884 1815 ntBASIC18.14■□□□□ 0.49
CCDC168Q8NDH2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC168Q8NDH2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC168Q8NDH2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC168Q8NDH2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC168Q8NDH2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.13■□□□□ 0.49
CCDC168Q8NDH2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC168Q8NDH2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC168Q8NDH2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC168Q8NDH2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC168Q8NDH2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC168Q8NDH2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC168Q8NDH2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC168Q8NDH2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC168Q8NDH2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCDC168Q8NDH2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC168Q8NDH2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC168Q8NDH2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC168Q8NDH2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC168Q8NDH2 AC138907.5-202ENST00000569484 235 ntBASIC18.12■□□□□ 0.49
CCDC168Q8NDH2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC168Q8NDH2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC168Q8NDH2 AC022211.4-201ENST00000625094 2161 ntBASIC18.12■□□□□ 0.49
CCDC168Q8NDH2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC168Q8NDH2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCDC168Q8NDH2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC168Q8NDH2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC168Q8NDH2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CCDC168Q8NDH2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC168Q8NDH2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC168Q8NDH2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC168Q8NDH2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CCDC168Q8NDH2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CCDC168Q8NDH2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC168Q8NDH2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC168Q8NDH2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC168Q8NDH2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC168Q8NDH2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC168Q8NDH2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC168Q8NDH2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC168Q8NDH2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC168Q8NDH2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC168Q8NDH2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC168Q8NDH2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC168Q8NDH2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC168Q8NDH2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC168Q8NDH2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC168Q8NDH2 KRT18P20-201ENST00000548986 1279 ntBASIC18.11■□□□□ 0.49
CCDC168Q8NDH2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC168Q8NDH2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC168Q8NDH2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC168Q8NDH2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC168Q8NDH2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC168Q8NDH2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC168Q8NDH2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC168Q8NDH2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC168Q8NDH2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC168Q8NDH2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC168Q8NDH2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC168Q8NDH2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC168Q8NDH2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC168Q8NDH2 OXCT2P1-201ENST00000447263 1535 ntBASIC18.1■□□□□ 0.49
CCDC168Q8NDH2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC168Q8NDH2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC168Q8NDH2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC168Q8NDH2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC168Q8NDH2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC168Q8NDH2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC168Q8NDH2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC168Q8NDH2 AC069236.1-201ENST00000604339 616 ntBASIC18.1■□□□□ 0.49
CCDC168Q8NDH2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC168Q8NDH2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC168Q8NDH2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CCDC168Q8NDH2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC168Q8NDH2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC168Q8NDH2 AL162412.1-201ENST00000567129 965 ntBASIC18.09■□□□□ 0.49
CCDC168Q8NDH2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC168Q8NDH2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC168Q8NDH2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC168Q8NDH2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC168Q8NDH2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC168Q8NDH2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms