Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
DDX60Q8IY21 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.88
DDX60Q8IY21 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.76■■□□□ 1.88
DDX60Q8IY21 OAS3-207ENST00000551007 998 ntTSL 2 BASIC26.76■■□□□ 1.88
DDX60Q8IY21 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC26.76■■□□□ 1.88
DDX60Q8IY21 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
DDX60Q8IY21 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.88
DDX60Q8IY21 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC26.76■■□□□ 1.88
DDX60Q8IY21 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
DDX60Q8IY21 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
DDX60Q8IY21 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.76■■□□□ 1.87
DDX60Q8IY21 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
DDX60Q8IY21 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
DDX60Q8IY21 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
DDX60Q8IY21 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
DDX60Q8IY21 APTR-205ENST00000447009 902 ntTSL 2 BASIC26.76■■□□□ 1.87
DDX60Q8IY21 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC26.76■■□□□ 1.87
DDX60Q8IY21 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26.76■■□□□ 1.87
DDX60Q8IY21 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
DDX60Q8IY21 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
DDX60Q8IY21 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.75■■□□□ 1.87
DDX60Q8IY21 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
DDX60Q8IY21 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
DDX60Q8IY21 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
DDX60Q8IY21 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
DDX60Q8IY21 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
DDX60Q8IY21 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
DDX60Q8IY21 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
DDX60Q8IY21 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
DDX60Q8IY21 GPX1P1-201ENST00000388829 606 ntBASIC26.74■■□□□ 1.87
DDX60Q8IY21 CYP2T1P-201ENST00000432607 1285 ntBASIC26.74■■□□□ 1.87
DDX60Q8IY21 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
DDX60Q8IY21 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
DDX60Q8IY21 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
DDX60Q8IY21 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
DDX60Q8IY21 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
DDX60Q8IY21 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
DDX60Q8IY21 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC26.73■■□□□ 1.87
DDX60Q8IY21 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC26.73■■□□□ 1.87
DDX60Q8IY21 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
DDX60Q8IY21 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.73■■□□□ 1.87
DDX60Q8IY21 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
DDX60Q8IY21 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
DDX60Q8IY21 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.73■■□□□ 1.87
DDX60Q8IY21 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
DDX60Q8IY21 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
DDX60Q8IY21 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC26.73■■□□□ 1.87
DDX60Q8IY21 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26.73■■□□□ 1.87
DDX60Q8IY21 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.73■■□□□ 1.87
DDX60Q8IY21 AL121832.2-201ENST00000610979 668 ntBASIC26.73■■□□□ 1.87
DDX60Q8IY21 AC010536.3-201ENST00000620306 533 ntBASIC26.73■■□□□ 1.87
DDX60Q8IY21 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.72■■□□□ 1.87
DDX60Q8IY21 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
DDX60Q8IY21 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
DDX60Q8IY21 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
DDX60Q8IY21 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
DDX60Q8IY21 AC005181.1-201ENST00000604782 1256 ntBASIC26.72■■□□□ 1.87
DDX60Q8IY21 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC26.72■■□□□ 1.87
DDX60Q8IY21 MDK-213ENST00000617138 635 ntTSL 2 BASIC26.72■■□□□ 1.87
DDX60Q8IY21 PARP1-210ENST00000629232 477 ntTSL 5 BASIC26.72■■□□□ 1.87
DDX60Q8IY21 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
DDX60Q8IY21 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
DDX60Q8IY21 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
DDX60Q8IY21 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
DDX60Q8IY21 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
DDX60Q8IY21 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26.71■■□□□ 1.87
DDX60Q8IY21 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC26.71■■□□□ 1.87
DDX60Q8IY21 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
DDX60Q8IY21 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
DDX60Q8IY21 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC26.71■■□□□ 1.87
DDX60Q8IY21 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
DDX60Q8IY21 AC007322.1-201ENST00000426983 750 ntBASIC26.7■■□□□ 1.87
DDX60Q8IY21 TSPY6P-201ENST00000448518 926 ntBASIC26.7■■□□□ 1.87
DDX60Q8IY21 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
DDX60Q8IY21 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
DDX60Q8IY21 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC26.7■■□□□ 1.87
DDX60Q8IY21 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.87
DDX60Q8IY21 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
DDX60Q8IY21 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
DDX60Q8IY21 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
DDX60Q8IY21 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC26.7■■□□□ 1.86
DDX60Q8IY21 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
DDX60Q8IY21 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.7■■□□□ 1.86
DDX60Q8IY21 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
DDX60Q8IY21 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
DDX60Q8IY21 AC137767.1-201ENST00000602918 1920 ntBASIC26.7■■□□□ 1.86
DDX60Q8IY21 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
DDX60Q8IY21 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
DDX60Q8IY21 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
DDX60Q8IY21 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
DDX60Q8IY21 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
DDX60Q8IY21 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC26.69■■□□□ 1.86
DDX60Q8IY21 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
DDX60Q8IY21 APTR-203ENST00000430801 583 ntTSL 5 BASIC26.69■■□□□ 1.86
DDX60Q8IY21 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC26.69■■□□□ 1.86
DDX60Q8IY21 AL138781.1-201ENST00000566567 1274 ntBASIC26.69■■□□□ 1.86
DDX60Q8IY21 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
DDX60Q8IY21 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
DDX60Q8IY21 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
DDX60Q8IY21 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms