Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
SYCE2Q6PIF2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SYCE2Q6PIF2 RPS2P52-201ENST00000469610 820 ntBASIC22.53■■□□□ 1.2
SYCE2Q6PIF2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.53■■□□□ 1.2
SYCE2Q6PIF2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
SYCE2Q6PIF2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
SYCE2Q6PIF2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SYCE2Q6PIF2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SYCE2Q6PIF2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SYCE2Q6PIF2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
SYCE2Q6PIF2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.52■■□□□ 1.2
SYCE2Q6PIF2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SYCE2Q6PIF2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.52■■□□□ 1.2
SYCE2Q6PIF2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SYCE2Q6PIF2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.52■■□□□ 1.2
SYCE2Q6PIF2 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.52■■□□□ 1.2
SYCE2Q6PIF2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SYCE2Q6PIF2 AC079089.2-201ENST00000531211 1277 ntBASIC22.52■■□□□ 1.2
SYCE2Q6PIF2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.52■■□□□ 1.2
SYCE2Q6PIF2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.52■■□□□ 1.2
SYCE2Q6PIF2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.52■■□□□ 1.2
SYCE2Q6PIF2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.52■■□□□ 1.2
SYCE2Q6PIF2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.52■■□□□ 1.2
SYCE2Q6PIF2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.52■■□□□ 1.2
SYCE2Q6PIF2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.52■■□□□ 1.2
SYCE2Q6PIF2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
SYCE2Q6PIF2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 AC007322.4-201ENST00000509611 723 ntBASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 AC092118.2-201ENST00000613495 667 ntBASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
SYCE2Q6PIF2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SYCE2Q6PIF2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SYCE2Q6PIF2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.5■■□□□ 1.19
SYCE2Q6PIF2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.5■■□□□ 1.19
SYCE2Q6PIF2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.5■■□□□ 1.19
SYCE2Q6PIF2 AC093787.1-201ENST00000450396 207 ntBASIC22.5■■□□□ 1.19
SYCE2Q6PIF2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SYCE2Q6PIF2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.5■■□□□ 1.19
SYCE2Q6PIF2 OR10C1-204ENST00000622521 1039 ntBASIC22.5■■□□□ 1.19
SYCE2Q6PIF2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.5■■□□□ 1.19
SYCE2Q6PIF2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SYCE2Q6PIF2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
SYCE2Q6PIF2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.5■■□□□ 1.19
SYCE2Q6PIF2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SYCE2Q6PIF2 AP004607.7-201ENST00000527152 1677 ntBASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 AC020928.2-201ENST00000588717 2197 ntBASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 AC098590.1-201ENST00000468126 897 ntBASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.49■■□□□ 1.19
SYCE2Q6PIF2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
SYCE2Q6PIF2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SYCE2Q6PIF2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.48■■□□□ 1.19
SYCE2Q6PIF2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.48■■□□□ 1.19
SYCE2Q6PIF2 AL512625.2-201ENST00000417533 625 ntBASIC22.48■■□□□ 1.19
SYCE2Q6PIF2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.48■■□□□ 1.19
SYCE2Q6PIF2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.48■■□□□ 1.19
SYCE2Q6PIF2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SYCE2Q6PIF2 EEF1DP3-203ENST00000566025 782 ntBASIC22.48■■□□□ 1.19
SYCE2Q6PIF2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.48■■□□□ 1.19
SYCE2Q6PIF2 AC016405.3-201ENST00000607710 860 ntBASIC22.48■■□□□ 1.19
SYCE2Q6PIF2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SYCE2Q6PIF2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SYCE2Q6PIF2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SYCE2Q6PIF2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SYCE2Q6PIF2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.48■■□□□ 1.19
SYCE2Q6PIF2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SYCE2Q6PIF2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms