Protein–RNA interactions for Protein: P63173

RPL38, 60S ribosomal protein L38, humanhuman

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38P63173 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPL38P63173 AC005229.4-201ENST00000610085 2198 ntBASIC20.65■□□□□ 0.9
RPL38P63173 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RPL38P63173 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPL38P63173 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPL38P63173 Z98882.1-201ENST00000622160 2253 ntBASIC20.64■□□□□ 0.89
RPL38P63173 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPL38P63173 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPL38P63173 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPL38P63173 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPL38P63173 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.64■□□□□ 0.89
RPL38P63173 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPL38P63173 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RPL38P63173 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
RPL38P63173 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.64■□□□□ 0.89
RPL38P63173 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RPL38P63173 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPL38P63173 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPL38P63173 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPL38P63173 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPL38P63173 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPL38P63173 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.63■□□□□ 0.89
RPL38P63173 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.63■□□□□ 0.89
RPL38P63173 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.63■□□□□ 0.89
RPL38P63173 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPL38P63173 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPL38P63173 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.63■□□□□ 0.89
RPL38P63173 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
RPL38P63173 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.63■□□□□ 0.89
RPL38P63173 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPL38P63173 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPL38P63173 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.63■□□□□ 0.89
RPL38P63173 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPL38P63173 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPL38P63173 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RPL38P63173 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPL38P63173 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
RPL38P63173 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.62■□□□□ 0.89
RPL38P63173 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.62■□□□□ 0.89
RPL38P63173 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPL38P63173 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPL38P63173 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.62■□□□□ 0.89
RPL38P63173 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.62■□□□□ 0.89
RPL38P63173 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPL38P63173 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPL38P63173 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPL38P63173 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPL38P63173 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPL38P63173 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPL38P63173 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.61■□□□□ 0.89
RPL38P63173 AC010141.3-201ENST00000456659 717 ntBASIC20.61■□□□□ 0.89
RPL38P63173 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RPL38P63173 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.61■□□□□ 0.89
RPL38P63173 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.61■□□□□ 0.89
RPL38P63173 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.61■□□□□ 0.89
RPL38P63173 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.61■□□□□ 0.89
RPL38P63173 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.61■□□□□ 0.89
RPL38P63173 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPL38P63173 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
RPL38P63173 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.61■□□□□ 0.89
RPL38P63173 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPL38P63173 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPL38P63173 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
RPL38P63173 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPL38P63173 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPL38P63173 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPL38P63173 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RPL38P63173 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RPL38P63173 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.6■□□□□ 0.89
RPL38P63173 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPL38P63173 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RPL38P63173 SERBP1P1-201ENST00000396021 1160 ntBASIC20.6■□□□□ 0.89
RPL38P63173 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RPL38P63173 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.6■□□□□ 0.89
RPL38P63173 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPL38P63173 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RPL38P63173 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPL38P63173 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RPL38P63173 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPL38P63173 SYT6-210ENST00000641643 1587 ntBASIC20.59■□□□□ 0.89
RPL38P63173 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.59■□□□□ 0.89
RPL38P63173 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RPL38P63173 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPL38P63173 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPL38P63173 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.59■□□□□ 0.89
RPL38P63173 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.59■□□□□ 0.89
RPL38P63173 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.59■□□□□ 0.89
RPL38P63173 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RPL38P63173 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.59■□□□□ 0.89
RPL38P63173 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.59■□□□□ 0.89
RPL38P63173 MIR4466-201ENST00000606121 54 ntBASIC20.59■□□□□ 0.89
RPL38P63173 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPL38P63173 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPL38P63173 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.59■□□□□ 0.89
RPL38P63173 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
RPL38P63173 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPL38P63173 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RPL38P63173 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RPL38P63173 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPL38P63173 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms