Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPL13AP40429 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL13AP40429 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RPL13AP40429 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC14.84□□□□□ -0.03
RPL13AP40429 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPL13AP40429 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL13AP40429 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL13AP40429 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC14.84□□□□□ -0.03
RPL13AP40429 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
RPL13AP40429 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPL13AP40429 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
RPL13AP40429 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.83□□□□□ -0.03
RPL13AP40429 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC14.83□□□□□ -0.03
RPL13AP40429 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.83□□□□□ -0.03
RPL13AP40429 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPL13AP40429 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL13AP40429 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.83□□□□□ -0.04
RPL13AP40429 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL13AP40429 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL13AP40429 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RPL13AP40429 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL13AP40429 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
RPL13AP40429 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL13AP40429 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPL13AP40429 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL13AP40429 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.83□□□□□ -0.04
RPL13AP40429 GCA-201ENST00000233612 1694 ntTSL 2 BASIC14.83□□□□□ -0.04
RPL13AP40429 AC026310.3-201ENST00000625186 2373 ntBASIC14.83□□□□□ -0.04
RPL13AP40429 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RPL13AP40429 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.83□□□□□ -0.04
RPL13AP40429 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.83□□□□□ -0.04
RPL13AP40429 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL13AP40429 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL13AP40429 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RPL13AP40429 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
RPL13AP40429 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC14.82□□□□□ -0.04
RPL13AP40429 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPL13AP40429 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPL13AP40429 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RPL13AP40429 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RPL13AP40429 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPL13AP40429 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPL13AP40429 AC060814.1-201ENST00000554326 538 ntBASIC14.82□□□□□ -0.04
RPL13AP40429 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPL13AP40429 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPL13AP40429 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPL13AP40429 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPL13AP40429 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPL13AP40429 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPL13AP40429 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RPL13AP40429 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPL13AP40429 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPL13AP40429 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPL13AP40429 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPL13AP40429 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL13AP40429 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.81□□□□□ -0.04
RPL13AP40429 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL13AP40429 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RPL13AP40429 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL13AP40429 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
RPL13AP40429 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC14.81□□□□□ -0.04
RPL13AP40429 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPL13AP40429 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC14.81□□□□□ -0.04
RPL13AP40429 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC14.81□□□□□ -0.04
RPL13AP40429 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL13AP40429 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL13AP40429 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RPL13AP40429 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.81□□□□□ -0.04
RPL13AP40429 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC14.81□□□□□ -0.04
RPL13AP40429 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RPL13AP40429 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL13AP40429 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPL13AP40429 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPL13AP40429 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPL13AP40429 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.8□□□□□ -0.04
RPL13AP40429 AC139530.1-201ENST00000575312 1977 ntBASIC14.8□□□□□ -0.04
RPL13AP40429 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPL13AP40429 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPL13AP40429 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPL13AP40429 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RPL13AP40429 REST-210ENST00000638187 1334 ntTSL 5 BASIC14.8□□□□□ -0.04
RPL13AP40429 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RPL13AP40429 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RPL13AP40429 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPL13AP40429 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RPL13AP40429 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RPL13AP40429 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPL13AP40429 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPL13AP40429 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPL13AP40429 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPL13AP40429 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPL13AP40429 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPL13AP40429 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPL13AP40429 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RPL13AP40429 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RPL13AP40429 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPL13AP40429 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RPL13AP40429 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPL13AP40429 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPL13AP40429 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms