Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCKBRP32239 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCKBRP32239 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.64■□□□□ 0.89
CCKBRP32239 AC092068.2-201ENST00000590491 1708 ntBASIC20.64■□□□□ 0.89
CCKBRP32239 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCKBRP32239 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCKBRP32239 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCKBRP32239 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCKBRP32239 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCKBRP32239 AC007322.1-201ENST00000426983 750 ntBASIC20.63■□□□□ 0.89
CCKBRP32239 AC079089.2-201ENST00000531211 1277 ntBASIC20.63■□□□□ 0.89
CCKBRP32239 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CCKBRP32239 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.63■□□□□ 0.89
CCKBRP32239 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCKBRP32239 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
CCKBRP32239 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCKBRP32239 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.62■□□□□ 0.89
CCKBRP32239 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCKBRP32239 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCKBRP32239 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCKBRP32239 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCKBRP32239 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCKBRP32239 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCKBRP32239 AC083906.2-201ENST00000511578 360 ntBASIC20.62■□□□□ 0.89
CCKBRP32239 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCKBRP32239 AC005181.1-201ENST00000604782 1256 ntBASIC20.62■□□□□ 0.89
CCKBRP32239 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.62■□□□□ 0.89
CCKBRP32239 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.62■□□□□ 0.89
CCKBRP32239 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.62■□□□□ 0.89
CCKBRP32239 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCKBRP32239 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCKBRP32239 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCKBRP32239 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCKBRP32239 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCKBRP32239 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCKBRP32239 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CCKBRP32239 TSPY6P-201ENST00000448518 926 ntBASIC20.61■□□□□ 0.89
CCKBRP32239 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
CCKBRP32239 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.61■□□□□ 0.89
CCKBRP32239 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCKBRP32239 ANOS2P-203ENST00000472227 1816 ntBASIC20.61■□□□□ 0.89
CCKBRP32239 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CCKBRP32239 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCKBRP32239 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCKBRP32239 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCKBRP32239 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.61■□□□□ 0.89
CCKBRP32239 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCKBRP32239 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.6■□□□□ 0.89
CCKBRP32239 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCKBRP32239 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.6■□□□□ 0.89
CCKBRP32239 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.6■□□□□ 0.89
CCKBRP32239 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.6■□□□□ 0.89
CCKBRP32239 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCKBRP32239 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.6■□□□□ 0.89
CCKBRP32239 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.6■□□□□ 0.89
CCKBRP32239 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCKBRP32239 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCKBRP32239 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCKBRP32239 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.6■□□□□ 0.89
CCKBRP32239 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCKBRP32239 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.6■□□□□ 0.89
CCKBRP32239 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.59■□□□□ 0.89
CCKBRP32239 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.59■□□□□ 0.89
CCKBRP32239 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CCKBRP32239 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CCKBRP32239 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCKBRP32239 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.59■□□□□ 0.89
CCKBRP32239 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.59■□□□□ 0.89
CCKBRP32239 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.59■□□□□ 0.89
CCKBRP32239 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCKBRP32239 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.59■□□□□ 0.89
CCKBRP32239 KRT18P20-201ENST00000548986 1279 ntBASIC20.59■□□□□ 0.89
CCKBRP32239 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.59■□□□□ 0.89
CCKBRP32239 SLC7A5P2-201ENST00000553010 536 ntBASIC20.59■□□□□ 0.89
CCKBRP32239 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCKBRP32239 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCKBRP32239 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCKBRP32239 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCKBRP32239 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCKBRP32239 LINC01960-201ENST00000563759 1884 ntBASIC20.58■□□□□ 0.89
CCKBRP32239 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCKBRP32239 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCKBRP32239 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.58■□□□□ 0.89
CCKBRP32239 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCKBRP32239 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.58■□□□□ 0.89
CCKBRP32239 AC010141.2-201ENST00000452426 721 ntBASIC20.58■□□□□ 0.89
CCKBRP32239 AC138907.5-202ENST00000569484 235 ntBASIC20.58■□□□□ 0.89
CCKBRP32239 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CCKBRP32239 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCKBRP32239 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCKBRP32239 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CCKBRP32239 DUSP8P5-201ENST00000422884 1815 ntBASIC20.57■□□□□ 0.88
CCKBRP32239 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCKBRP32239 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCKBRP32239 GUSBP6-202ENST00000438529 1198 ntBASIC20.57■□□□□ 0.88
CCKBRP32239 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.57■□□□□ 0.88
CCKBRP32239 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.57■□□□□ 0.88
CCKBRP32239 CD99P1-205ENST00000527459 561 ntBASIC20.57■□□□□ 0.88
CCKBRP32239 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.57■□□□□ 0.88
CCKBRP32239 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms