Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.41■□□□□ 0.86
MMP11P24347 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.41■□□□□ 0.86
MMP11P24347 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
MMP11P24347 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP11P24347 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP11P24347 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MMP11P24347 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP11P24347 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP11P24347 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP11P24347 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP11P24347 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP11P24347 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
MMP11P24347 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP11P24347 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
MMP11P24347 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MMP11P24347 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
MMP11P24347 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MMP11P24347 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.4■□□□□ 0.86
MMP11P24347 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.4■□□□□ 0.86
MMP11P24347 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP11P24347 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
MMP11P24347 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP11P24347 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MMP11P24347 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MMP11P24347 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
MMP11P24347 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
MMP11P24347 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MMP11P24347 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
MMP11P24347 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MMP11P24347 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MMP11P24347 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
MMP11P24347 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP11P24347 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP11P24347 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP11P24347 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.39■□□□□ 0.85
MMP11P24347 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.39■□□□□ 0.85
MMP11P24347 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.39■□□□□ 0.85
MMP11P24347 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
MMP11P24347 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP11P24347 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP11P24347 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP11P24347 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MMP11P24347 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
MMP11P24347 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
MMP11P24347 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MMP11P24347 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
MMP11P24347 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MMP11P24347 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MMP11P24347 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.38■□□□□ 0.85
MMP11P24347 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.38■□□□□ 0.85
MMP11P24347 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.38■□□□□ 0.85
MMP11P24347 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MMP11P24347 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MMP11P24347 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MMP11P24347 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
MMP11P24347 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP11P24347 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MMP11P24347 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP11P24347 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.37■□□□□ 0.85
MMP11P24347 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MMP11P24347 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
MMP11P24347 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
MMP11P24347 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MMP11P24347 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.37■□□□□ 0.85
MMP11P24347 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.37■□□□□ 0.85
MMP11P24347 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.37■□□□□ 0.85
MMP11P24347 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
MMP11P24347 AC092437.1-201ENST00000624794 1048 ntBASIC20.37■□□□□ 0.85
MMP11P24347 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.37■□□□□ 0.85
MMP11P24347 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.37■□□□□ 0.85
MMP11P24347 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP11P24347 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP11P24347 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP11P24347 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP11P24347 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MMP11P24347 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.36■□□□□ 0.85
MMP11P24347 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
MMP11P24347 AC137767.1-201ENST00000602918 1920 ntBASIC20.36■□□□□ 0.85
MMP11P24347 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
MMP11P24347 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.36■□□□□ 0.85
MMP11P24347 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.36■□□□□ 0.85
MMP11P24347 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MMP11P24347 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.36■□□□□ 0.85
MMP11P24347 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MMP11P24347 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP11P24347 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP11P24347 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
MMP11P24347 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
MMP11P24347 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP11P24347 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.35■□□□□ 0.85
MMP11P24347 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
MMP11P24347 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.35■□□□□ 0.85
MMP11P24347 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.35■□□□□ 0.85
MMP11P24347 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP11P24347 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.35■□□□□ 0.85
MMP11P24347 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP11P24347 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.35■□□□□ 0.85
MMP11P24347 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP11P24347 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP11P24347 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms