Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC13.31□□□□□ -0.28
PDE6GP18545 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDE6GP18545 OXCT2P1-201ENST00000447263 1535 ntBASIC13.31□□□□□ -0.28
PDE6GP18545 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PDE6GP18545 BOD1-206ENST00000480951 814 ntTSL 2 BASIC13.31□□□□□ -0.28
PDE6GP18545 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PDE6GP18545 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.31□□□□□ -0.28
PDE6GP18545 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDE6GP18545 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDE6GP18545 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDE6GP18545 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PDE6GP18545 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PDE6GP18545 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.31□□□□□ -0.28
PDE6GP18545 AC144652.1-201ENST00000609974 1624 ntBASIC13.31□□□□□ -0.28
PDE6GP18545 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDE6GP18545 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PDE6GP18545 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC13.31□□□□□ -0.28
PDE6GP18545 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDE6GP18545 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC13.3□□□□□ -0.28
PDE6GP18545 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC13.3□□□□□ -0.28
PDE6GP18545 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PDE6GP18545 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PDE6GP18545 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PDE6GP18545 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PDE6GP18545 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PDE6GP18545 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC13.3□□□□□ -0.28
PDE6GP18545 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC13.3□□□□□ -0.28
PDE6GP18545 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PDE6GP18545 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PDE6GP18545 AC044849.2-201ENST00000606596 710 ntBASIC13.3□□□□□ -0.28
PDE6GP18545 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
PDE6GP18545 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC13.3□□□□□ -0.28
PDE6GP18545 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PDE6GP18545 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC13.3□□□□□ -0.28
PDE6GP18545 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PDE6GP18545 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PDE6GP18545 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PDE6GP18545 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
PDE6GP18545 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PDE6GP18545 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC13.29□□□□□ -0.28
PDE6GP18545 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.29□□□□□ -0.28
PDE6GP18545 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PDE6GP18545 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PDE6GP18545 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PDE6GP18545 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PDE6GP18545 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PDE6GP18545 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC13.29□□□□□ -0.28
PDE6GP18545 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PDE6GP18545 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PDE6GP18545 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC13.29□□□□□ -0.28
PDE6GP18545 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PDE6GP18545 LINC01971-201ENST00000617888 1048 ntBASIC13.29□□□□□ -0.28
PDE6GP18545 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PDE6GP18545 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC13.29□□□□□ -0.28
PDE6GP18545 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC13.29□□□□□ -0.28
PDE6GP18545 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PDE6GP18545 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC13.29□□□□□ -0.28
PDE6GP18545 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PDE6GP18545 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PDE6GP18545 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PDE6GP18545 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
PDE6GP18545 AF106564.1-201ENST00000607058 2553 ntBASIC13.28□□□□□ -0.28
PDE6GP18545 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PDE6GP18545 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.28□□□□□ -0.28
PDE6GP18545 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PDE6GP18545 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
PDE6GP18545 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PDE6GP18545 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PDE6GP18545 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PDE6GP18545 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
PDE6GP18545 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PDE6GP18545 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PDE6GP18545 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PDE6GP18545 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC13.28□□□□□ -0.28
PDE6GP18545 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PDE6GP18545 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PDE6GP18545 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PDE6GP18545 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PDE6GP18545 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC13.28□□□□□ -0.28
PDE6GP18545 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PDE6GP18545 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
PDE6GP18545 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
PDE6GP18545 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PDE6GP18545 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PDE6GP18545 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
PDE6GP18545 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.28□□□□□ -0.28
PDE6GP18545 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PDE6GP18545 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PDE6GP18545 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PDE6GP18545 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PDE6GP18545 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PDE6GP18545 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC13.27□□□□□ -0.28
PDE6GP18545 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
PDE6GP18545 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
PDE6GP18545 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PDE6GP18545 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
PDE6GP18545 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PDE6GP18545 AP006261.1-201ENST00000584783 668 ntBASIC13.27□□□□□ -0.29
PDE6GP18545 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
PDE6GP18545 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms