Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.23■□□□□ 0.51
ZNF728P0DKX0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.23■□□□□ 0.51
ZNF728P0DKX0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.23■□□□□ 0.51
ZNF728P0DKX0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
ZNF728P0DKX0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
ZNF728P0DKX0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF728P0DKX0 AC133637.1-201ENST00000624115 1537 ntBASIC18.23■□□□□ 0.51
ZNF728P0DKX0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF728P0DKX0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF728P0DKX0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF728P0DKX0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF728P0DKX0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.22■□□□□ 0.51
ZNF728P0DKX0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF728P0DKX0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.22■□□□□ 0.51
ZNF728P0DKX0 SERBP1P1-201ENST00000396021 1160 ntBASIC18.22■□□□□ 0.51
ZNF728P0DKX0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.22■□□□□ 0.51
ZNF728P0DKX0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ZNF728P0DKX0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF728P0DKX0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
ZNF728P0DKX0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.22■□□□□ 0.51
ZNF728P0DKX0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.22■□□□□ 0.51
ZNF728P0DKX0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF728P0DKX0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF728P0DKX0 LINC01960-201ENST00000563759 1884 ntBASIC18.22■□□□□ 0.51
ZNF728P0DKX0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.22■□□□□ 0.51
ZNF728P0DKX0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF728P0DKX0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 AC004687.1-201ENST00000579003 1625 ntBASIC18.21■□□□□ 0.51
ZNF728P0DKX0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF728P0DKX0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF728P0DKX0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF728P0DKX0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF728P0DKX0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF728P0DKX0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.2■□□□□ 0.5
ZNF728P0DKX0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF728P0DKX0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.2■□□□□ 0.5
ZNF728P0DKX0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF728P0DKX0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF728P0DKX0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF728P0DKX0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF728P0DKX0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF728P0DKX0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ZNF728P0DKX0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.19■□□□□ 0.5
ZNF728P0DKX0 UNC93B3-201ENST00000308076 687 ntBASIC18.19■□□□□ 0.5
ZNF728P0DKX0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF728P0DKX0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.19■□□□□ 0.5
ZNF728P0DKX0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF728P0DKX0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.19■□□□□ 0.5
ZNF728P0DKX0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.19■□□□□ 0.5
ZNF728P0DKX0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ZNF728P0DKX0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ZNF728P0DKX0 AC011298.3-201ENST00000615796 283 ntBASIC18.19■□□□□ 0.5
ZNF728P0DKX0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF728P0DKX0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ZNF728P0DKX0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF728P0DKX0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ZNF728P0DKX0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNF728P0DKX0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ZNF728P0DKX0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ZNF728P0DKX0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF728P0DKX0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF728P0DKX0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNF728P0DKX0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF728P0DKX0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ZNF728P0DKX0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.18■□□□□ 0.5
ZNF728P0DKX0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF728P0DKX0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.18■□□□□ 0.5
ZNF728P0DKX0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF728P0DKX0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ZNF728P0DKX0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNF728P0DKX0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ZNF728P0DKX0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF728P0DKX0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF728P0DKX0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF728P0DKX0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms