Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEC22BO75396 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEC22BO75396 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SEC22BO75396 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEC22BO75396 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SEC22BO75396 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEC22BO75396 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.67■□□□□ 0.9
SEC22BO75396 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.67■□□□□ 0.9
SEC22BO75396 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEC22BO75396 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.67■□□□□ 0.9
SEC22BO75396 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.67■□□□□ 0.9
SEC22BO75396 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.67■□□□□ 0.9
SEC22BO75396 AC010525.1-201ENST00000585559 441 ntBASIC20.67■□□□□ 0.9
SEC22BO75396 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.67■□□□□ 0.9
SEC22BO75396 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SEC22BO75396 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEC22BO75396 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.67■□□□□ 0.9
SEC22BO75396 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SEC22BO75396 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEC22BO75396 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEC22BO75396 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SEC22BO75396 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEC22BO75396 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.66■□□□□ 0.9
SEC22BO75396 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.66■□□□□ 0.9
SEC22BO75396 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.66■□□□□ 0.9
SEC22BO75396 SYT6-210ENST00000641643 1587 ntBASIC20.66■□□□□ 0.9
SEC22BO75396 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEC22BO75396 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEC22BO75396 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEC22BO75396 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SEC22BO75396 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
SEC22BO75396 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.65■□□□□ 0.9
SEC22BO75396 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEC22BO75396 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SEC22BO75396 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEC22BO75396 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SEC22BO75396 AC010141.3-201ENST00000456659 717 ntBASIC20.65■□□□□ 0.9
SEC22BO75396 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SEC22BO75396 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.65■□□□□ 0.9
SEC22BO75396 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEC22BO75396 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEC22BO75396 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.64■□□□□ 0.9
SEC22BO75396 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SEC22BO75396 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.64■□□□□ 0.9
SEC22BO75396 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SEC22BO75396 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.64■□□□□ 0.9
SEC22BO75396 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEC22BO75396 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SEC22BO75396 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEC22BO75396 SERBP1P1-201ENST00000396021 1160 ntBASIC20.64■□□□□ 0.89
SEC22BO75396 DUX4L19-201ENST00000557448 1267 ntBASIC20.64■□□□□ 0.89
SEC22BO75396 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SEC22BO75396 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SEC22BO75396 MIR4466-201ENST00000606121 54 ntBASIC20.64■□□□□ 0.89
SEC22BO75396 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.64■□□□□ 0.89
SEC22BO75396 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.64■□□□□ 0.89
SEC22BO75396 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.64■□□□□ 0.89
SEC22BO75396 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEC22BO75396 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SEC22BO75396 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.64■□□□□ 0.89
SEC22BO75396 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEC22BO75396 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEC22BO75396 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.63■□□□□ 0.89
SEC22BO75396 AC026471.6-201ENST00000622954 1905 ntBASIC20.63■□□□□ 0.89
SEC22BO75396 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SEC22BO75396 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEC22BO75396 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEC22BO75396 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.63■□□□□ 0.89
SEC22BO75396 AL138724.1-201ENST00000606771 1088 ntBASIC20.63■□□□□ 0.89
SEC22BO75396 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SEC22BO75396 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEC22BO75396 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEC22BO75396 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SEC22BO75396 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.63■□□□□ 0.89
SEC22BO75396 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.63■□□□□ 0.89
SEC22BO75396 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEC22BO75396 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEC22BO75396 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SEC22BO75396 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.62■□□□□ 0.89
SEC22BO75396 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEC22BO75396 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.62■□□□□ 0.89
SEC22BO75396 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SEC22BO75396 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SEC22BO75396 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.62■□□□□ 0.89
SEC22BO75396 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SEC22BO75396 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SEC22BO75396 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEC22BO75396 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
SEC22BO75396 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SEC22BO75396 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
SEC22BO75396 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEC22BO75396 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
SEC22BO75396 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEC22BO75396 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.61■□□□□ 0.89
SEC22BO75396 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.61■□□□□ 0.89
SEC22BO75396 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.61■□□□□ 0.89
SEC22BO75396 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEC22BO75396 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SEC22BO75396 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEC22BO75396 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms