Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PFDN1O60925 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PFDN1O60925 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PFDN1O60925 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PFDN1O60925 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PFDN1O60925 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PFDN1O60925 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PFDN1O60925 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PFDN1O60925 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PFDN1O60925 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PFDN1O60925 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
PFDN1O60925 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PFDN1O60925 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.25■□□□□ 0.67
PFDN1O60925 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PFDN1O60925 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.25■□□□□ 0.67
PFDN1O60925 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PFDN1O60925 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PFDN1O60925 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PFDN1O60925 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.25■□□□□ 0.67
PFDN1O60925 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.25■□□□□ 0.67
PFDN1O60925 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PFDN1O60925 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PFDN1O60925 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PFDN1O60925 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
PFDN1O60925 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN1O60925 AC020763.4-201ENST00000623414 4170 ntBASIC19.24■□□□□ 0.67
PFDN1O60925 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.24■□□□□ 0.67
PFDN1O60925 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN1O60925 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.24■□□□□ 0.67
PFDN1O60925 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN1O60925 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN1O60925 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
PFDN1O60925 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN1O60925 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.24■□□□□ 0.67
PFDN1O60925 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.24■□□□□ 0.67
PFDN1O60925 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN1O60925 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
PFDN1O60925 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN1O60925 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN1O60925 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PFDN1O60925 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN1O60925 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.24■□□□□ 0.67
PFDN1O60925 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN1O60925 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PFDN1O60925 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN1O60925 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN1O60925 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.23■□□□□ 0.67
PFDN1O60925 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN1O60925 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN1O60925 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PFDN1O60925 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN1O60925 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN1O60925 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN1O60925 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.23■□□□□ 0.67
PFDN1O60925 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN1O60925 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PFDN1O60925 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.23■□□□□ 0.67
PFDN1O60925 FEM1AP4-201ENST00000443167 1987 ntBASIC19.23■□□□□ 0.67
PFDN1O60925 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PFDN1O60925 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.22■□□□□ 0.67
PFDN1O60925 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PFDN1O60925 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PFDN1O60925 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PFDN1O60925 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.22■□□□□ 0.67
PFDN1O60925 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.22■□□□□ 0.67
PFDN1O60925 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PFDN1O60925 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.22■□□□□ 0.67
PFDN1O60925 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.22■□□□□ 0.67
PFDN1O60925 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PFDN1O60925 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PFDN1O60925 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PFDN1O60925 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PFDN1O60925 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PFDN1O60925 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PFDN1O60925 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PFDN1O60925 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PFDN1O60925 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PFDN1O60925 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
PFDN1O60925 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PFDN1O60925 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PFDN1O60925 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PFDN1O60925 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
PFDN1O60925 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PFDN1O60925 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
PFDN1O60925 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PFDN1O60925 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PFDN1O60925 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PFDN1O60925 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PFDN1O60925 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PFDN1O60925 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.2■□□□□ 0.66
PFDN1O60925 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PFDN1O60925 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PFDN1O60925 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PFDN1O60925 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PFDN1O60925 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PFDN1O60925 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PFDN1O60925 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PFDN1O60925 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
PFDN1O60925 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.2■□□□□ 0.66
PFDN1O60925 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms