Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPHS1O60500 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NPHS1O60500 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPHS1O60500 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.93■□□□□ 0.94
NPHS1O60500 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NPHS1O60500 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.93■□□□□ 0.94
NPHS1O60500 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPHS1O60500 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.93■□□□□ 0.94
NPHS1O60500 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPHS1O60500 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPHS1O60500 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPHS1O60500 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPHS1O60500 AC087239.1-201ENST00000622671 572 ntBASIC20.93■□□□□ 0.94
NPHS1O60500 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.93■□□□□ 0.94
NPHS1O60500 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPHS1O60500 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPHS1O60500 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.93■□□□□ 0.94
NPHS1O60500 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
NPHS1O60500 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPHS1O60500 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPHS1O60500 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.92■□□□□ 0.94
NPHS1O60500 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPHS1O60500 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NPHS1O60500 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.92■□□□□ 0.94
NPHS1O60500 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.92■□□□□ 0.94
NPHS1O60500 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPHS1O60500 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPHS1O60500 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.92■□□□□ 0.94
NPHS1O60500 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NPHS1O60500 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.92■□□□□ 0.94
NPHS1O60500 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.92■□□□□ 0.94
NPHS1O60500 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NPHS1O60500 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPHS1O60500 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPHS1O60500 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPHS1O60500 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPHS1O60500 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPHS1O60500 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPHS1O60500 AC010141.3-201ENST00000456659 717 ntBASIC20.91■□□□□ 0.94
NPHS1O60500 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
NPHS1O60500 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.91■□□□□ 0.94
NPHS1O60500 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPHS1O60500 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.91■□□□□ 0.94
NPHS1O60500 MIR3181-201ENST00000578512 73 ntBASIC20.91■□□□□ 0.94
NPHS1O60500 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NPHS1O60500 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPHS1O60500 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPHS1O60500 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPHS1O60500 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
NPHS1O60500 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NPHS1O60500 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPHS1O60500 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPHS1O60500 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPHS1O60500 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
NPHS1O60500 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.9■□□□□ 0.94
NPHS1O60500 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPHS1O60500 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.9■□□□□ 0.94
NPHS1O60500 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPHS1O60500 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPHS1O60500 KRT16P3-201ENST00000439127 1283 ntBASIC20.9■□□□□ 0.94
NPHS1O60500 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.9■□□□□ 0.94
NPHS1O60500 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPHS1O60500 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
NPHS1O60500 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NPHS1O60500 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPHS1O60500 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPHS1O60500 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NPHS1O60500 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.89■□□□□ 0.94
NPHS1O60500 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.89■□□□□ 0.94
NPHS1O60500 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
NPHS1O60500 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NPHS1O60500 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPHS1O60500 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPHS1O60500 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NPHS1O60500 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.89■□□□□ 0.93
NPHS1O60500 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPHS1O60500 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.89■□□□□ 0.93
NPHS1O60500 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
NPHS1O60500 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPHS1O60500 OXCT2P1-201ENST00000447263 1535 ntBASIC20.88■□□□□ 0.93
NPHS1O60500 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NPHS1O60500 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
NPHS1O60500 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPHS1O60500 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.88■□□□□ 0.93
NPHS1O60500 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPHS1O60500 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NPHS1O60500 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.88■□□□□ 0.93
NPHS1O60500 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NPHS1O60500 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.88■□□□□ 0.93
NPHS1O60500 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPHS1O60500 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NPHS1O60500 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPHS1O60500 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPHS1O60500 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
NPHS1O60500 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPHS1O60500 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPHS1O60500 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPHS1O60500 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPHS1O60500 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPHS1O60500 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms