Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSX5O60225 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.33■□□□□ 0.52
SSX5O60225 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSX5O60225 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.33■□□□□ 0.52
SSX5O60225 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX5O60225 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX5O60225 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSX5O60225 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
SSX5O60225 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSX5O60225 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX5O60225 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SSX5O60225 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX5O60225 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX5O60225 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSX5O60225 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.32■□□□□ 0.52
SSX5O60225 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.32■□□□□ 0.52
SSX5O60225 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSX5O60225 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSX5O60225 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX5O60225 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX5O60225 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX5O60225 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX5O60225 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SSX5O60225 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX5O60225 FEM1AP4-201ENST00000443167 1987 ntBASIC18.31■□□□□ 0.52
SSX5O60225 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.31■□□□□ 0.52
SSX5O60225 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.31■□□□□ 0.52
SSX5O60225 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX5O60225 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSX5O60225 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SSX5O60225 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SSX5O60225 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX5O60225 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SSX5O60225 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SSX5O60225 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.31■□□□□ 0.52
SSX5O60225 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SSX5O60225 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.31■□□□□ 0.52
SSX5O60225 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.31■□□□□ 0.52
SSX5O60225 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX5O60225 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX5O60225 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SSX5O60225 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX5O60225 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
SSX5O60225 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX5O60225 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX5O60225 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSX5O60225 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX5O60225 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.3■□□□□ 0.52
SSX5O60225 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX5O60225 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX5O60225 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX5O60225 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSX5O60225 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.3■□□□□ 0.52
SSX5O60225 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SSX5O60225 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX5O60225 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.3■□□□□ 0.52
SSX5O60225 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSX5O60225 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.3■□□□□ 0.52
SSX5O60225 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSX5O60225 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.3■□□□□ 0.52
SSX5O60225 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.3■□□□□ 0.52
SSX5O60225 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSX5O60225 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SSX5O60225 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SSX5O60225 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.3■□□□□ 0.52
SSX5O60225 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSX5O60225 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.3■□□□□ 0.52
SSX5O60225 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSX5O60225 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SSX5O60225 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSX5O60225 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.3■□□□□ 0.52
SSX5O60225 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSX5O60225 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSX5O60225 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSX5O60225 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSX5O60225 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SSX5O60225 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.29■□□□□ 0.52
SSX5O60225 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSX5O60225 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.29■□□□□ 0.52
SSX5O60225 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSX5O60225 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSX5O60225 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SSX5O60225 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SSX5O60225 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSX5O60225 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSX5O60225 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.28■□□□□ 0.52
SSX5O60225 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.28■□□□□ 0.52
SSX5O60225 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.28■□□□□ 0.52
SSX5O60225 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.28■□□□□ 0.52
SSX5O60225 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSX5O60225 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SSX5O60225 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
SSX5O60225 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSX5O60225 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSX5O60225 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.28■□□□□ 0.52
SSX5O60225 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SSX5O60225 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SSX5O60225 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSX5O60225 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSX5O60225 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms