Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 AC010542.4-201ENST00000563151 1910 ntBASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 FAM99A-202ENST00000538190 1989 ntBASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-3A0A0B4J271 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 AC079089.2-201ENST00000531211 1277 ntBASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 AC087239.1-201ENST00000622671 572 ntBASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 SYT6-210ENST00000641643 1587 ntBASIC15.92■□□□□ 0.14
TRAV12-3A0A0B4J271 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-3A0A0B4J271 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-3A0A0B4J271 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-3A0A0B4J271 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-3A0A0B4J271 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-3A0A0B4J271 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
TRAV12-3A0A0B4J271 MIR4466-201ENST00000606121 54 ntBASIC15.91■□□□□ 0.14
TRAV12-3A0A0B4J271 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRAV12-3A0A0B4J271 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRAV12-3A0A0B4J271 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-3A0A0B4J271 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-3A0A0B4J271 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-3A0A0B4J271 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-3A0A0B4J271 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TRAV12-3A0A0B4J271 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-3A0A0B4J271 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 OR2I1P-207ENST00000453522 948 ntBASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 DUX4L19-201ENST00000557448 1267 ntBASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 AC068587.7-201ENST00000641602 218 ntBASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 OR7E47P-201ENST00000546390 1422 ntBASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 AL137060.1-201ENST00000618151 2648 ntBASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRAV12-3A0A0B4J271 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
TRAV12-3A0A0B4J271 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-3A0A0B4J271 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms