Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGC4Q9Y5F7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGC4Q9Y5F7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGC4Q9Y5F7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGC4Q9Y5F7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHGC4Q9Y5F7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGC4Q9Y5F7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGC4Q9Y5F7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGC4Q9Y5F7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.76■■□□□ 1.07
PCDHGC4Q9Y5F7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGC4Q9Y5F7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHGC4Q9Y5F7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDHGC4Q9Y5F7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGC4Q9Y5F7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PCDHGC4Q9Y5F7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGC4Q9Y5F7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGC4Q9Y5F7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGC4Q9Y5F7 EP400NL-214ENST00000641289 2402 ntBASIC21.75■■□□□ 1.07
PCDHGC4Q9Y5F7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHGC4Q9Y5F7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGC4Q9Y5F7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGC4Q9Y5F7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGC4Q9Y5F7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGC4Q9Y5F7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGC4Q9Y5F7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGC4Q9Y5F7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHGC4Q9Y5F7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHGC4Q9Y5F7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PCDHGC4Q9Y5F7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHGC4Q9Y5F7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDHGC4Q9Y5F7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGC4Q9Y5F7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGC4Q9Y5F7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGC4Q9Y5F7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGC4Q9Y5F7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGC4Q9Y5F7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
PCDHGC4Q9Y5F7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PCDHGC4Q9Y5F7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGC4Q9Y5F7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHGC4Q9Y5F7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHGC4Q9Y5F7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGC4Q9Y5F7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHGC4Q9Y5F7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGC4Q9Y5F7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGC4Q9Y5F7 ECEL1P1-201ENST00000373592 1742 ntBASIC21.74■■□□□ 1.07
PCDHGC4Q9Y5F7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHGC4Q9Y5F7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC4Q9Y5F7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC4Q9Y5F7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC4Q9Y5F7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC4Q9Y5F7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHGC4Q9Y5F7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC4Q9Y5F7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC4Q9Y5F7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PCDHGC4Q9Y5F7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC4Q9Y5F7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHGC4Q9Y5F7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PCDHGC4Q9Y5F7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC4Q9Y5F7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC4Q9Y5F7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC4Q9Y5F7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC4Q9Y5F7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC4Q9Y5F7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC4Q9Y5F7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGC4Q9Y5F7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PCDHGC4Q9Y5F7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGC4Q9Y5F7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGC4Q9Y5F7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGC4Q9Y5F7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGC4Q9Y5F7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PCDHGC4Q9Y5F7 AC092053.2-201ENST00000640557 1818 ntBASIC21.72■■□□□ 1.07
PCDHGC4Q9Y5F7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGC4Q9Y5F7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGC4Q9Y5F7 YBX1P1-201ENST00000445822 960 ntBASIC21.72■■□□□ 1.07
PCDHGC4Q9Y5F7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.72■■□□□ 1.07
PCDHGC4Q9Y5F7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PCDHGC4Q9Y5F7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGC4Q9Y5F7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PCDHGC4Q9Y5F7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PCDHGC4Q9Y5F7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGC4Q9Y5F7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PCDHGC4Q9Y5F7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDHGC4Q9Y5F7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGC4Q9Y5F7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGC4Q9Y5F7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGC4Q9Y5F7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PCDHGC4Q9Y5F7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGC4Q9Y5F7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGC4Q9Y5F7 AC026271.2-201ENST00000428091 497 ntBASIC21.71■■□□□ 1.07
PCDHGC4Q9Y5F7 RARRES2P6-201ENST00000567333 442 ntBASIC21.71■■□□□ 1.07
PCDHGC4Q9Y5F7 TPRG1LP1-201ENST00000598702 760 ntBASIC21.71■■□□□ 1.07
PCDHGC4Q9Y5F7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGC4Q9Y5F7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PCDHGC4Q9Y5F7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHGC4Q9Y5F7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDHGC4Q9Y5F7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PCDHGC4Q9Y5F7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PCDHGC4Q9Y5F7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PCDHGC4Q9Y5F7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHGC4Q9Y5F7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms