Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF7Q9UBF6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF7Q9UBF6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF7Q9UBF6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF7Q9UBF6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF7Q9UBF6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF7Q9UBF6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF7Q9UBF6 BX005040.4-201ENST00000637145 1518 ntBASIC18.16■□□□□ 0.5
RNF7Q9UBF6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RNF7Q9UBF6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF7Q9UBF6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF7Q9UBF6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
RNF7Q9UBF6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF7Q9UBF6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF7Q9UBF6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RNF7Q9UBF6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF7Q9UBF6 AP004607.7-201ENST00000527152 1677 ntBASIC18.15■□□□□ 0.5
RNF7Q9UBF6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 ECEL1P1-201ENST00000373592 1742 ntBASIC18.15■□□□□ 0.5
RNF7Q9UBF6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 MIR6084-201ENST00000622012 110 ntBASIC18.15■□□□□ 0.5
RNF7Q9UBF6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.15■□□□□ 0.5
RNF7Q9UBF6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RNF7Q9UBF6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.14■□□□□ 0.5
RNF7Q9UBF6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RNF7Q9UBF6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RNF7Q9UBF6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF7Q9UBF6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF7Q9UBF6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RNF7Q9UBF6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.14■□□□□ 0.49
RNF7Q9UBF6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF7Q9UBF6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF7Q9UBF6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF7Q9UBF6 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.14■□□□□ 0.49
RNF7Q9UBF6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF7Q9UBF6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF7Q9UBF6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF7Q9UBF6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF7Q9UBF6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF7Q9UBF6 AC092053.2-201ENST00000640557 1818 ntBASIC18.14■□□□□ 0.49
RNF7Q9UBF6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 PKD1P6-201ENST00000343738 4769 ntBASIC18.13■□□□□ 0.49
RNF7Q9UBF6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 AC009237.3-201ENST00000393279 1427 ntBASIC18.13■□□□□ 0.49
RNF7Q9UBF6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF7Q9UBF6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF7Q9UBF6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF7Q9UBF6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF7Q9UBF6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF7Q9UBF6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF7Q9UBF6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RNF7Q9UBF6 AC027612.3-201ENST00000413684 1047 ntBASIC18.12■□□□□ 0.49
RNF7Q9UBF6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF7Q9UBF6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RNF7Q9UBF6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF7Q9UBF6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF7Q9UBF6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF7Q9UBF6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF7Q9UBF6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF7Q9UBF6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RNF7Q9UBF6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
RNF7Q9UBF6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF7Q9UBF6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms