Protein–RNA interactions for Protein: Q9NY12

GAR1, H/ACA ribonucleoprotein complex subunit 1, humanhuman

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1Q9NY12 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
GAR1Q9NY12 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
GAR1Q9NY12 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GAR1Q9NY12 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.39■□□□□ 0.37
GAR1Q9NY12 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GAR1Q9NY12 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GAR1Q9NY12 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GAR1Q9NY12 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GAR1Q9NY12 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
GAR1Q9NY12 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
GAR1Q9NY12 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.38■□□□□ 0.37
GAR1Q9NY12 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.38■□□□□ 0.37
GAR1Q9NY12 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.38■□□□□ 0.37
GAR1Q9NY12 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
GAR1Q9NY12 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
GAR1Q9NY12 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.38■□□□□ 0.37
GAR1Q9NY12 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GAR1Q9NY12 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GAR1Q9NY12 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.38■□□□□ 0.37
GAR1Q9NY12 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GAR1Q9NY12 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GAR1Q9NY12 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GAR1Q9NY12 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GAR1Q9NY12 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GAR1Q9NY12 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GAR1Q9NY12 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GAR1Q9NY12 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GAR1Q9NY12 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GAR1Q9NY12 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.37■□□□□ 0.37
GAR1Q9NY12 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GAR1Q9NY12 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GAR1Q9NY12 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GAR1Q9NY12 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GAR1Q9NY12 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GAR1Q9NY12 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
GAR1Q9NY12 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GAR1Q9NY12 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.37■□□□□ 0.37
GAR1Q9NY12 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GAR1Q9NY12 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GAR1Q9NY12 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GAR1Q9NY12 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
GAR1Q9NY12 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GAR1Q9NY12 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
GAR1Q9NY12 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GAR1Q9NY12 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GAR1Q9NY12 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GAR1Q9NY12 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
GAR1Q9NY12 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GAR1Q9NY12 LINC01529-204ENST00000636474 1715 ntBASIC17.35■□□□□ 0.37
GAR1Q9NY12 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.35■□□□□ 0.37
GAR1Q9NY12 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
GAR1Q9NY12 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GAR1Q9NY12 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.35■□□□□ 0.37
GAR1Q9NY12 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.35■□□□□ 0.37
GAR1Q9NY12 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
GAR1Q9NY12 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.35■□□□□ 0.37
GAR1Q9NY12 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.35■□□□□ 0.37
GAR1Q9NY12 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.35■□□□□ 0.37
GAR1Q9NY12 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GAR1Q9NY12 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
GAR1Q9NY12 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GAR1Q9NY12 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
GAR1Q9NY12 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GAR1Q9NY12 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
GAR1Q9NY12 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GAR1Q9NY12 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.35■□□□□ 0.37
GAR1Q9NY12 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.35■□□□□ 0.37
GAR1Q9NY12 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GAR1Q9NY12 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GAR1Q9NY12 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GAR1Q9NY12 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GAR1Q9NY12 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GAR1Q9NY12 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
GAR1Q9NY12 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
GAR1Q9NY12 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GAR1Q9NY12 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GAR1Q9NY12 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GAR1Q9NY12 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GAR1Q9NY12 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.34■□□□□ 0.37
GAR1Q9NY12 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
GAR1Q9NY12 AL353803.4-201ENST00000565882 1934 ntBASIC17.34■□□□□ 0.37
GAR1Q9NY12 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.34■□□□□ 0.37
GAR1Q9NY12 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GAR1Q9NY12 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
GAR1Q9NY12 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GAR1Q9NY12 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GAR1Q9NY12 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
GAR1Q9NY12 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
GAR1Q9NY12 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GAR1Q9NY12 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.33■□□□□ 0.37
GAR1Q9NY12 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.33■□□□□ 0.37
GAR1Q9NY12 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GAR1Q9NY12 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GAR1Q9NY12 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
GAR1Q9NY12 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
GAR1Q9NY12 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.33■□□□□ 0.37
GAR1Q9NY12 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
GAR1Q9NY12 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
GAR1Q9NY12 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GAR1Q9NY12 TSPY9P-201ENST00000440215 945 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms