Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN23Q96B33 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.77■■□□□ 1.08
CLDN23Q96B33 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.77■■□□□ 1.08
CLDN23Q96B33 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.77■■□□□ 1.08
CLDN23Q96B33 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN23Q96B33 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
CLDN23Q96B33 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CLDN23Q96B33 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN23Q96B33 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN23Q96B33 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN23Q96B33 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN23Q96B33 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.76■■□□□ 1.07
CLDN23Q96B33 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN23Q96B33 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN23Q96B33 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.76■■□□□ 1.07
CLDN23Q96B33 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.76■■□□□ 1.07
CLDN23Q96B33 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN23Q96B33 GCSHP5-201ENST00000443090 522 ntBASIC21.76■■□□□ 1.07
CLDN23Q96B33 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.76■■□□□ 1.07
CLDN23Q96B33 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN23Q96B33 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.76■■□□□ 1.07
CLDN23Q96B33 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.76■■□□□ 1.07
CLDN23Q96B33 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
CLDN23Q96B33 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CLDN23Q96B33 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CLDN23Q96B33 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN23Q96B33 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
CLDN23Q96B33 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN23Q96B33 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN23Q96B33 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN23Q96B33 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CLDN23Q96B33 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN23Q96B33 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
CLDN23Q96B33 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN23Q96B33 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN23Q96B33 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN23Q96B33 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CLDN23Q96B33 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN23Q96B33 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN23Q96B33 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.75■■□□□ 1.07
CLDN23Q96B33 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.75■■□□□ 1.07
CLDN23Q96B33 RARRES2P4-201ENST00000514074 484 ntBASIC21.75■■□□□ 1.07
CLDN23Q96B33 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.75■■□□□ 1.07
CLDN23Q96B33 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.75■■□□□ 1.07
CLDN23Q96B33 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.75■■□□□ 1.07
CLDN23Q96B33 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
CLDN23Q96B33 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN23Q96B33 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CLDN23Q96B33 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN23Q96B33 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CLDN23Q96B33 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN23Q96B33 AC093787.1-201ENST00000450396 207 ntBASIC21.74■■□□□ 1.07
CLDN23Q96B33 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.74■■□□□ 1.07
CLDN23Q96B33 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.74■■□□□ 1.07
CLDN23Q96B33 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.74■■□□□ 1.07
CLDN23Q96B33 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.74■■□□□ 1.07
CLDN23Q96B33 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.74■■□□□ 1.07
CLDN23Q96B33 AC083880.1-201ENST00000608266 535 ntBASIC21.74■■□□□ 1.07
CLDN23Q96B33 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN23Q96B33 MYC-209ENST00000641252 345 ntBASIC21.74■■□□□ 1.07
CLDN23Q96B33 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN23Q96B33 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
CLDN23Q96B33 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN23Q96B33 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN23Q96B33 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN23Q96B33 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.73■■□□□ 1.07
CLDN23Q96B33 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN23Q96B33 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.73■■□□□ 1.07
CLDN23Q96B33 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.73■■□□□ 1.07
CLDN23Q96B33 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.73■■□□□ 1.07
CLDN23Q96B33 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.73■■□□□ 1.07
CLDN23Q96B33 AC079089.2-201ENST00000531211 1277 ntBASIC21.73■■□□□ 1.07
CLDN23Q96B33 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.73■■□□□ 1.07
CLDN23Q96B33 EEF1DP3-203ENST00000566025 782 ntBASIC21.73■■□□□ 1.07
CLDN23Q96B33 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.73■■□□□ 1.07
CLDN23Q96B33 AC008694.1-202ENST00000636953 945 ntBASIC21.73■■□□□ 1.07
CLDN23Q96B33 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CLDN23Q96B33 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.72■■□□□ 1.07
CLDN23Q96B33 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
CLDN23Q96B33 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN23Q96B33 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN23Q96B33 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN23Q96B33 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN23Q96B33 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN23Q96B33 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.72■■□□□ 1.07
CLDN23Q96B33 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.72■■□□□ 1.07
CLDN23Q96B33 ESRRAP1-201ENST00000400596 1257 ntBASIC21.72■■□□□ 1.07
CLDN23Q96B33 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.72■■□□□ 1.07
CLDN23Q96B33 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CLDN23Q96B33 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CLDN23Q96B33 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.72■■□□□ 1.07
CLDN23Q96B33 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN23Q96B33 AC069236.1-201ENST00000604339 616 ntBASIC21.72■■□□□ 1.07
CLDN23Q96B33 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.72■■□□□ 1.07
CLDN23Q96B33 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN23Q96B33 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN23Q96B33 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN23Q96B33 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.71■■□□□ 1.07
CLDN23Q96B33 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN23Q96B33 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms