Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
AP3S1Q92572 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP3S1Q92572 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.96■□□□□ 0.63
AP3S1Q92572 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.96■□□□□ 0.63
AP3S1Q92572 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
AP3S1Q92572 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3S1Q92572 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.96■□□□□ 0.63
AP3S1Q92572 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3S1Q92572 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.96■□□□□ 0.63
AP3S1Q92572 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
AP3S1Q92572 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3S1Q92572 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3S1Q92572 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3S1Q92572 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3S1Q92572 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP3S1Q92572 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
AP3S1Q92572 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3S1Q92572 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.95■□□□□ 0.62
AP3S1Q92572 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3S1Q92572 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.95■□□□□ 0.62
AP3S1Q92572 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3S1Q92572 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP3S1Q92572 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3S1Q92572 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AP3S1Q92572 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3S1Q92572 LINC01529-204ENST00000636474 1715 ntBASIC18.94■□□□□ 0.62
AP3S1Q92572 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.94■□□□□ 0.62
AP3S1Q92572 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
AP3S1Q92572 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AP3S1Q92572 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
AP3S1Q92572 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.94■□□□□ 0.62
AP3S1Q92572 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3S1Q92572 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AP3S1Q92572 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.94■□□□□ 0.62
AP3S1Q92572 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.94■□□□□ 0.62
AP3S1Q92572 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AP3S1Q92572 RPS2P35-201ENST00000443417 897 ntBASIC18.94■□□□□ 0.62
AP3S1Q92572 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.94■□□□□ 0.62
AP3S1Q92572 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
AP3S1Q92572 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.94■□□□□ 0.62
AP3S1Q92572 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3S1Q92572 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
AP3S1Q92572 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
AP3S1Q92572 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
AP3S1Q92572 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3S1Q92572 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.93■□□□□ 0.62
AP3S1Q92572 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AP3S1Q92572 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3S1Q92572 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3S1Q92572 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AP3S1Q92572 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3S1Q92572 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3S1Q92572 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
AP3S1Q92572 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.93■□□□□ 0.62
AP3S1Q92572 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3S1Q92572 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3S1Q92572 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
AP3S1Q92572 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3S1Q92572 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
AP3S1Q92572 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3S1Q92572 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.92■□□□□ 0.62
AP3S1Q92572 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
AP3S1Q92572 AC004448.1-201ENST00000458332 883 ntBASIC18.92■□□□□ 0.62
AP3S1Q92572 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
AP3S1Q92572 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
AP3S1Q92572 CA15P2-201ENST00000611168 834 ntBASIC18.92■□□□□ 0.62
AP3S1Q92572 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.92■□□□□ 0.62
AP3S1Q92572 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.92■□□□□ 0.62
AP3S1Q92572 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3S1Q92572 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3S1Q92572 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3S1Q92572 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3S1Q92572 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
AP3S1Q92572 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3S1Q92572 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AP3S1Q92572 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AP3S1Q92572 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3S1Q92572 LONRF2P2-201ENST00000439212 571 ntBASIC18.91■□□□□ 0.62
AP3S1Q92572 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3S1Q92572 AC009086.3-201ENST00000623486 1008 ntBASIC18.91■□□□□ 0.62
AP3S1Q92572 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3S1Q92572 FEM1AP1-201ENST00000431297 1995 ntBASIC18.91■□□□□ 0.62
AP3S1Q92572 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3S1Q92572 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3S1Q92572 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
AP3S1Q92572 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3S1Q92572 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.9■□□□□ 0.62
AP3S1Q92572 OXCT2P1-201ENST00000447263 1535 ntBASIC18.9■□□□□ 0.62
AP3S1Q92572 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3S1Q92572 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3S1Q92572 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP3S1Q92572 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3S1Q92572 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
AP3S1Q92572 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3S1Q92572 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
AP3S1Q92572 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
AP3S1Q92572 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3S1Q92572 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3S1Q92572 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3S1Q92572 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms