Protein–RNA interactions for Protein: Q8NC96

NECAP1, Adaptin ear-binding coat-associated protein 1, humanhuman

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1Q8NC96 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NECAP1Q8NC96 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.38■□□□□ 0.37
NECAP1Q8NC96 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECAP1Q8NC96 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NECAP1Q8NC96 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.37■□□□□ 0.37
NECAP1Q8NC96 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.37■□□□□ 0.37
NECAP1Q8NC96 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.37■□□□□ 0.37
NECAP1Q8NC96 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.37■□□□□ 0.37
NECAP1Q8NC96 AC009086.3-201ENST00000623486 1008 ntBASIC17.37■□□□□ 0.37
NECAP1Q8NC96 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.37■□□□□ 0.37
NECAP1Q8NC96 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NECAP1Q8NC96 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECAP1Q8NC96 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NECAP1Q8NC96 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.37■□□□□ 0.37
NECAP1Q8NC96 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NECAP1Q8NC96 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NECAP1Q8NC96 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 SRD5A1P1-201ENST00000442297 786 ntBASIC17.36■□□□□ 0.37
NECAP1Q8NC96 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 FBXW4P1-201ENST00000426721 2239 ntBASIC17.36■□□□□ 0.37
NECAP1Q8NC96 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.36■□□□□ 0.37
NECAP1Q8NC96 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NECAP1Q8NC96 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.35■□□□□ 0.37
NECAP1Q8NC96 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NECAP1Q8NC96 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.35■□□□□ 0.37
NECAP1Q8NC96 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.35■□□□□ 0.37
NECAP1Q8NC96 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.35■□□□□ 0.37
NECAP1Q8NC96 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.35■□□□□ 0.37
NECAP1Q8NC96 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.35■□□□□ 0.37
NECAP1Q8NC96 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECAP1Q8NC96 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.35■□□□□ 0.37
NECAP1Q8NC96 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECAP1Q8NC96 AC092171.4-201ENST00000609130 632 ntBASIC17.35■□□□□ 0.37
NECAP1Q8NC96 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.35■□□□□ 0.37
NECAP1Q8NC96 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.35■□□□□ 0.37
NECAP1Q8NC96 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NECAP1Q8NC96 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECAP1Q8NC96 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NECAP1Q8NC96 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.35■□□□□ 0.37
NECAP1Q8NC96 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NECAP1Q8NC96 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NECAP1Q8NC96 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECAP1Q8NC96 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECAP1Q8NC96 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECAP1Q8NC96 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NECAP1Q8NC96 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.34■□□□□ 0.37
NECAP1Q8NC96 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NECAP1Q8NC96 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NECAP1Q8NC96 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.34■□□□□ 0.37
NECAP1Q8NC96 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NECAP1Q8NC96 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NECAP1Q8NC96 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NECAP1Q8NC96 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NECAP1Q8NC96 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NECAP1Q8NC96 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.33■□□□□ 0.37
NECAP1Q8NC96 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
NECAP1Q8NC96 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NECAP1Q8NC96 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.33■□□□□ 0.37
NECAP1Q8NC96 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
NECAP1Q8NC96 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECAP1Q8NC96 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECAP1Q8NC96 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NECAP1Q8NC96 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms