Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
ZFHX4Q86UP3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZFHX4Q86UP3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZFHX4Q86UP3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZFHX4Q86UP3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZFHX4Q86UP3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.47■□□□□ 0.87
ZFHX4Q86UP3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.46■□□□□ 0.87
ZFHX4Q86UP3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.46■□□□□ 0.87
ZFHX4Q86UP3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZFHX4Q86UP3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZFHX4Q86UP3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZFHX4Q86UP3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.46■□□□□ 0.87
ZFHX4Q86UP3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.46■□□□□ 0.87
ZFHX4Q86UP3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZFHX4Q86UP3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
ZFHX4Q86UP3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZFHX4Q86UP3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.46■□□□□ 0.87
ZFHX4Q86UP3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZFHX4Q86UP3 AC026366.1-201ENST00000488803 879 ntBASIC20.46■□□□□ 0.87
ZFHX4Q86UP3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.46■□□□□ 0.87
ZFHX4Q86UP3 RN7SL850P-201ENST00000579959 291 ntBASIC20.46■□□□□ 0.87
ZFHX4Q86UP3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZFHX4Q86UP3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.46■□□□□ 0.87
ZFHX4Q86UP3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
ZFHX4Q86UP3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.45■□□□□ 0.86
ZFHX4Q86UP3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.45■□□□□ 0.86
ZFHX4Q86UP3 AL121894.2-201ENST00000602977 491 ntBASIC20.45■□□□□ 0.86
ZFHX4Q86UP3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZFHX4Q86UP3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.45■□□□□ 0.86
ZFHX4Q86UP3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZFHX4Q86UP3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.45■□□□□ 0.86
ZFHX4Q86UP3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZFHX4Q86UP3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ZFHX4Q86UP3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.45■□□□□ 0.86
ZFHX4Q86UP3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.45■□□□□ 0.86
ZFHX4Q86UP3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZFHX4Q86UP3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZFHX4Q86UP3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZFHX4Q86UP3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
ZFHX4Q86UP3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZFHX4Q86UP3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.44■□□□□ 0.86
ZFHX4Q86UP3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.44■□□□□ 0.86
ZFHX4Q86UP3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.44■□□□□ 0.86
ZFHX4Q86UP3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.44■□□□□ 0.86
ZFHX4Q86UP3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZFHX4Q86UP3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
ZFHX4Q86UP3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZFHX4Q86UP3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZFHX4Q86UP3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZFHX4Q86UP3 LINC01529-204ENST00000636474 1715 ntBASIC20.43■□□□□ 0.86
ZFHX4Q86UP3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZFHX4Q86UP3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZFHX4Q86UP3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZFHX4Q86UP3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.43■□□□□ 0.86
ZFHX4Q86UP3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZFHX4Q86UP3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZFHX4Q86UP3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.43■□□□□ 0.86
ZFHX4Q86UP3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZFHX4Q86UP3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZFHX4Q86UP3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
ZFHX4Q86UP3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZFHX4Q86UP3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.43■□□□□ 0.86
ZFHX4Q86UP3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.42■□□□□ 0.86
ZFHX4Q86UP3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFHX4Q86UP3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
ZFHX4Q86UP3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFHX4Q86UP3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.42■□□□□ 0.86
ZFHX4Q86UP3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ZFHX4Q86UP3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
ZFHX4Q86UP3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.42■□□□□ 0.86
ZFHX4Q86UP3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFHX4Q86UP3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.42■□□□□ 0.86
ZFHX4Q86UP3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFHX4Q86UP3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFHX4Q86UP3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZFHX4Q86UP3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZFHX4Q86UP3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFHX4Q86UP3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.42■□□□□ 0.86
ZFHX4Q86UP3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZFHX4Q86UP3 POU5F1P4-201ENST00000413175 1085 ntBASIC20.41■□□□□ 0.86
ZFHX4Q86UP3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.41■□□□□ 0.86
ZFHX4Q86UP3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.41■□□□□ 0.86
ZFHX4Q86UP3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.41■□□□□ 0.86
ZFHX4Q86UP3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
ZFHX4Q86UP3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
ZFHX4Q86UP3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.41■□□□□ 0.86
ZFHX4Q86UP3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZFHX4Q86UP3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.41■□□□□ 0.86
ZFHX4Q86UP3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ZFHX4Q86UP3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ZFHX4Q86UP3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZFHX4Q86UP3 AC079630.1-202ENST00000618127 1840 ntBASIC20.4■□□□□ 0.86
ZFHX4Q86UP3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.4■□□□□ 0.86
ZFHX4Q86UP3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.4■□□□□ 0.86
ZFHX4Q86UP3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ZFHX4Q86UP3 AC079140.4-201ENST00000507448 529 ntBASIC20.4■□□□□ 0.86
ZFHX4Q86UP3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.4■□□□□ 0.86
ZFHX4Q86UP3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ZFHX4Q86UP3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
ZFHX4Q86UP3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms