Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.35■□□□□ 0.69
KRTCAP3Q53RY4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.35■□□□□ 0.69
KRTCAP3Q53RY4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.35■□□□□ 0.69
KRTCAP3Q53RY4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.35■□□□□ 0.69
KRTCAP3Q53RY4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRTCAP3Q53RY4 OR7E47P-201ENST00000546390 1422 ntBASIC19.34■□□□□ 0.69
KRTCAP3Q53RY4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.34■□□□□ 0.69
KRTCAP3Q53RY4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KRTCAP3Q53RY4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRTCAP3Q53RY4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
KRTCAP3Q53RY4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KRTCAP3Q53RY4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRTCAP3Q53RY4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRTCAP3Q53RY4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRTCAP3Q53RY4 AC138907.5-202ENST00000569484 235 ntBASIC19.34■□□□□ 0.69
KRTCAP3Q53RY4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
KRTCAP3Q53RY4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.34■□□□□ 0.69
KRTCAP3Q53RY4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
KRTCAP3Q53RY4 AC005181.1-201ENST00000604782 1256 ntBASIC19.34■□□□□ 0.69
KRTCAP3Q53RY4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.34■□□□□ 0.69
KRTCAP3Q53RY4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
KRTCAP3Q53RY4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KRTCAP3Q53RY4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.33■□□□□ 0.68
KRTCAP3Q53RY4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KRTCAP3Q53RY4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRTCAP3Q53RY4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
KRTCAP3Q53RY4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.33■□□□□ 0.68
KRTCAP3Q53RY4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.33■□□□□ 0.68
KRTCAP3Q53RY4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
KRTCAP3Q53RY4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
KRTCAP3Q53RY4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.33■□□□□ 0.68
KRTCAP3Q53RY4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
KRTCAP3Q53RY4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRTCAP3Q53RY4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
KRTCAP3Q53RY4 AC010141.2-201ENST00000452426 721 ntBASIC19.32■□□□□ 0.68
KRTCAP3Q53RY4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.32■□□□□ 0.68
KRTCAP3Q53RY4 AC142086.2-201ENST00000569753 217 ntBASIC19.32■□□□□ 0.68
KRTCAP3Q53RY4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
KRTCAP3Q53RY4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
KRTCAP3Q53RY4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRTCAP3Q53RY4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRTCAP3Q53RY4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRTCAP3Q53RY4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRTCAP3Q53RY4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRTCAP3Q53RY4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRTCAP3Q53RY4 DUSP8P5-201ENST00000422884 1815 ntBASIC19.31■□□□□ 0.68
KRTCAP3Q53RY4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.31■□□□□ 0.68
KRTCAP3Q53RY4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.31■□□□□ 0.68
KRTCAP3Q53RY4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.31■□□□□ 0.68
KRTCAP3Q53RY4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
KRTCAP3Q53RY4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.31■□□□□ 0.68
KRTCAP3Q53RY4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.3■□□□□ 0.68
KRTCAP3Q53RY4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
KRTCAP3Q53RY4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRTCAP3Q53RY4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRTCAP3Q53RY4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
KRTCAP3Q53RY4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRTCAP3Q53RY4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.3■□□□□ 0.68
KRTCAP3Q53RY4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.3■□□□□ 0.68
KRTCAP3Q53RY4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.3■□□□□ 0.68
KRTCAP3Q53RY4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.3■□□□□ 0.68
KRTCAP3Q53RY4 TSPY6P-201ENST00000448518 926 ntBASIC19.3■□□□□ 0.68
KRTCAP3Q53RY4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRTCAP3Q53RY4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRTCAP3Q53RY4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRTCAP3Q53RY4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRTCAP3Q53RY4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRTCAP3Q53RY4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRTCAP3Q53RY4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRTCAP3Q53RY4 SLC29A4P1-201ENST00000398760 971 ntBASIC19.29■□□□□ 0.68
KRTCAP3Q53RY4 SLC7A5P1-201ENST00000568957 537 ntBASIC19.29■□□□□ 0.68
KRTCAP3Q53RY4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRTCAP3Q53RY4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
KRTCAP3Q53RY4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.29■□□□□ 0.68
KRTCAP3Q53RY4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRTCAP3Q53RY4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRTCAP3Q53RY4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRTCAP3Q53RY4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRTCAP3Q53RY4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRTCAP3Q53RY4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
KRTCAP3Q53RY4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRTCAP3Q53RY4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRTCAP3Q53RY4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRTCAP3Q53RY4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.28■□□□□ 0.68
KRTCAP3Q53RY4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRTCAP3Q53RY4 AL050303.2-201ENST00000619798 666 ntBASIC19.28■□□□□ 0.68
KRTCAP3Q53RY4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRTCAP3Q53RY4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.27■□□□□ 0.68
KRTCAP3Q53RY4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.27■□□□□ 0.68
KRTCAP3Q53RY4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRTCAP3Q53RY4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.27■□□□□ 0.68
KRTCAP3Q53RY4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRTCAP3Q53RY4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRTCAP3Q53RY4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.27■□□□□ 0.68
KRTCAP3Q53RY4 SLC7A5P2-201ENST00000553010 536 ntBASIC19.27■□□□□ 0.68
KRTCAP3Q53RY4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.27■□□□□ 0.68
KRTCAP3Q53RY4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRTCAP3Q53RY4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.27■□□□□ 0.68
KRTCAP3Q53RY4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
KRTCAP3Q53RY4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms