Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
LINC01554Q52M75 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC01554Q52M75 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
LINC01554Q52M75 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01554Q52M75 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
LINC01554Q52M75 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01554Q52M75 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC01554Q52M75 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01554Q52M75 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01554Q52M75 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01554Q52M75 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01554Q52M75 AC008813.1-201ENST00000536597 885 ntBASIC10.77□□□□□ -0.69
LINC01554Q52M75 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC01554Q52M75 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC01554Q52M75 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC01554Q52M75 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01554Q52M75 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
LINC01554Q52M75 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC10.77□□□□□ -0.69
LINC01554Q52M75 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC01554Q52M75 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01554Q52M75 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC01554Q52M75 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01554Q52M75 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01554Q52M75 C11orf96-202ENST00000528572 1834 ntBASIC10.77□□□□□ -0.69
LINC01554Q52M75 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01554Q52M75 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01554Q52M75 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
LINC01554Q52M75 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC01554Q52M75 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC01554Q52M75 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC10.77□□□□□ -0.69
LINC01554Q52M75 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC01554Q52M75 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC01554Q52M75 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
LINC01554Q52M75 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC01554Q52M75 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
LINC01554Q52M75 LINC01971-201ENST00000617888 1048 ntBASIC10.76□□□□□ -0.69
LINC01554Q52M75 HGH1-207ENST00000628266 258 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC01554Q52M75 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
LINC01554Q52M75 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC01554Q52M75 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 AL359504.2-201ENST00000605506 1601 ntBASIC10.76□□□□□ -0.69
LINC01554Q52M75 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC01554Q52M75 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01554Q52M75 AR-207ENST00000612010 3896 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC01554Q52M75 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
LINC01554Q52M75 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
LINC01554Q52M75 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC01554Q52M75 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC01554Q52M75 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 FER1L4-210ENST00000615531 5998 ntBASIC10.75□□□□□ -0.69
LINC01554Q52M75 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
LINC01554Q52M75 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC10.75□□□□□ -0.69
LINC01554Q52M75 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
LINC01554Q52M75 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
LINC01554Q52M75 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
LINC01554Q52M75 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC10.75□□□□□ -0.69
LINC01554Q52M75 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC01554Q52M75 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC10.75□□□□□ -0.69
LINC01554Q52M75 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 AC005082.1-201ENST00000413042 2259 ntBASIC10.75□□□□□ -0.69
LINC01554Q52M75 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
LINC01554Q52M75 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
LINC01554Q52M75 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01554Q52M75 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms