Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.78■■□□□ 1.56
USH1GQ495M9 AC137761.2-201ENST00000561729 223 ntBASIC24.78■■□□□ 1.56
USH1GQ495M9 AC145350.3-201ENST00000569033 163 ntBASIC24.78■■□□□ 1.56
USH1GQ495M9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.78■■□□□ 1.56
USH1GQ495M9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
USH1GQ495M9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
USH1GQ495M9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
USH1GQ495M9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
USH1GQ495M9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
USH1GQ495M9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
USH1GQ495M9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
USH1GQ495M9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.77■■□□□ 1.56
USH1GQ495M9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.77■■□□□ 1.56
USH1GQ495M9 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.77■■□□□ 1.56
USH1GQ495M9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
USH1GQ495M9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
USH1GQ495M9 RARRES2P11-201ENST00000635158 484 ntBASIC24.77■■□□□ 1.56
USH1GQ495M9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
USH1GQ495M9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
USH1GQ495M9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
USH1GQ495M9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
USH1GQ495M9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
USH1GQ495M9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
USH1GQ495M9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
USH1GQ495M9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
USH1GQ495M9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
USH1GQ495M9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.76■■□□□ 1.55
USH1GQ495M9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
USH1GQ495M9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
USH1GQ495M9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.76■■□□□ 1.55
USH1GQ495M9 AC139530.1-201ENST00000575312 1977 ntBASIC24.76■■□□□ 1.55
USH1GQ495M9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
USH1GQ495M9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
USH1GQ495M9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
USH1GQ495M9 AC016769.1-201ENST00000409132 1010 ntBASIC24.75■■□□□ 1.55
USH1GQ495M9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.75■■□□□ 1.55
USH1GQ495M9 AC090192.1-201ENST00000517740 490 ntBASIC24.75■■□□□ 1.55
USH1GQ495M9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.75■■□□□ 1.55
USH1GQ495M9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.75■■□□□ 1.55
USH1GQ495M9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.75■■□□□ 1.55
USH1GQ495M9 AC055733.4-201ENST00000638462 1354 ntBASIC24.75■■□□□ 1.55
USH1GQ495M9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
USH1GQ495M9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
USH1GQ495M9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
USH1GQ495M9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
USH1GQ495M9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
USH1GQ495M9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
USH1GQ495M9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
USH1GQ495M9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.74■■□□□ 1.55
USH1GQ495M9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.74■■□□□ 1.55
USH1GQ495M9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.74■■□□□ 1.55
USH1GQ495M9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
USH1GQ495M9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.73■■□□□ 1.55
USH1GQ495M9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
USH1GQ495M9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.73■■□□□ 1.55
USH1GQ495M9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
USH1GQ495M9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
USH1GQ495M9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24.73■■□□□ 1.55
USH1GQ495M9 KRT87P-202ENST00000534226 1464 ntBASIC24.73■■□□□ 1.55
USH1GQ495M9 KRT19P1-201ENST00000405746 1186 ntBASIC24.73■■□□□ 1.55
USH1GQ495M9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.73■■□□□ 1.55
USH1GQ495M9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
USH1GQ495M9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
USH1GQ495M9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.73■■□□□ 1.55
USH1GQ495M9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
USH1GQ495M9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
USH1GQ495M9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.73■■□□□ 1.55
USH1GQ495M9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
USH1GQ495M9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.73■■□□□ 1.55
USH1GQ495M9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
USH1GQ495M9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
USH1GQ495M9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
USH1GQ495M9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.72■■□□□ 1.55
USH1GQ495M9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
USH1GQ495M9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
USH1GQ495M9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
USH1GQ495M9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.72■■□□□ 1.55
USH1GQ495M9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.72■■□□□ 1.55
USH1GQ495M9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.72■■□□□ 1.55
USH1GQ495M9 AC104187.1-201ENST00000607510 612 ntBASIC24.72■■□□□ 1.55
USH1GQ495M9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
USH1GQ495M9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
USH1GQ495M9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.72■■□□□ 1.55
USH1GQ495M9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
USH1GQ495M9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
USH1GQ495M9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.71■■□□□ 1.55
USH1GQ495M9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.71■■□□□ 1.55
USH1GQ495M9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.71■■□□□ 1.55
USH1GQ495M9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
USH1GQ495M9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
USH1GQ495M9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.71■■□□□ 1.55
USH1GQ495M9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
USH1GQ495M9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
USH1GQ495M9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
USH1GQ495M9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
USH1GQ495M9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.71■■□□□ 1.55
USH1GQ495M9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
USH1GQ495M9 AC006015.1-201ENST00000429970 570 ntBASIC24.71■■□□□ 1.55
USH1GQ495M9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
USH1GQ495M9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms