Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
PDE6BP35913 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.81■■□□□ 1.88
PDE6BP35913 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
PDE6BP35913 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC26.81■■□□□ 1.88
PDE6BP35913 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC26.81■■□□□ 1.88
PDE6BP35913 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PDE6BP35913 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC26.81■■□□□ 1.88
PDE6BP35913 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC26.81■■□□□ 1.88
PDE6BP35913 AC079089.2-201ENST00000531211 1277 ntBASIC26.81■■□□□ 1.88
PDE6BP35913 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.81■■□□□ 1.88
PDE6BP35913 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
PDE6BP35913 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC26.81■■□□□ 1.88
PDE6BP35913 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PDE6BP35913 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PDE6BP35913 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PDE6BP35913 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
PDE6BP35913 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PDE6BP35913 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PDE6BP35913 PRORSD1P-201ENST00000295112 541 ntBASIC26.8■■□□□ 1.88
PDE6BP35913 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PDE6BP35913 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC26.8■■□□□ 1.88
PDE6BP35913 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC26.8■■□□□ 1.88
PDE6BP35913 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC26.8■■□□□ 1.88
PDE6BP35913 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.8■■□□□ 1.88
PDE6BP35913 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC26.8■■□□□ 1.88
PDE6BP35913 OR10C1-204ENST00000622521 1039 ntBASIC26.8■■□□□ 1.88
PDE6BP35913 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PDE6BP35913 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
PDE6BP35913 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC26.79■■□□□ 1.88
PDE6BP35913 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC26.79■■□□□ 1.88
PDE6BP35913 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.79■■□□□ 1.88
PDE6BP35913 AC007322.4-201ENST00000509611 723 ntBASIC26.79■■□□□ 1.88
PDE6BP35913 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
PDE6BP35913 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC26.79■■□□□ 1.88
PDE6BP35913 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
PDE6BP35913 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
PDE6BP35913 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PDE6BP35913 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.78■■□□□ 1.88
PDE6BP35913 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PDE6BP35913 AP004607.7-201ENST00000527152 1677 ntBASIC26.78■■□□□ 1.88
PDE6BP35913 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PDE6BP35913 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
PDE6BP35913 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.78■■□□□ 1.88
PDE6BP35913 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PDE6BP35913 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
PDE6BP35913 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
PDE6BP35913 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PDE6BP35913 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
PDE6BP35913 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PDE6BP35913 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PDE6BP35913 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PDE6BP35913 PHB2-213ENST00000546111 858 ntTSL 2 BASIC26.77■■□□□ 1.88
PDE6BP35913 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PDE6BP35913 AC092118.2-201ENST00000613495 667 ntBASIC26.77■■□□□ 1.88
PDE6BP35913 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PDE6BP35913 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PDE6BP35913 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
PDE6BP35913 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PDE6BP35913 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PDE6BP35913 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
PDE6BP35913 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PDE6BP35913 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.76■■□□□ 1.87
PDE6BP35913 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PDE6BP35913 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
PDE6BP35913 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.76■■□□□ 1.87
PDE6BP35913 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.76■■□□□ 1.87
PDE6BP35913 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.75■■□□□ 1.87
PDE6BP35913 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PDE6BP35913 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.75■■□□□ 1.87
PDE6BP35913 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PDE6BP35913 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC26.75■■□□□ 1.87
PDE6BP35913 AL512625.2-201ENST00000417533 625 ntBASIC26.75■■□□□ 1.87
PDE6BP35913 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PDE6BP35913 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC26.75■■□□□ 1.87
PDE6BP35913 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.75■■□□□ 1.87
PDE6BP35913 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PDE6BP35913 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
PDE6BP35913 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC26.75■■□□□ 1.87
PDE6BP35913 AC008694.1-202ENST00000636953 945 ntBASIC26.75■■□□□ 1.87
PDE6BP35913 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.75■■□□□ 1.87
PDE6BP35913 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PDE6BP35913 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.75■■□□□ 1.87
PDE6BP35913 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
PDE6BP35913 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC26.75■■□□□ 1.87
PDE6BP35913 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26.74■■□□□ 1.87
PDE6BP35913 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PDE6BP35913 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
PDE6BP35913 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.74■■□□□ 1.87
PDE6BP35913 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.74■■□□□ 1.87
PDE6BP35913 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
PDE6BP35913 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.74■■□□□ 1.87
PDE6BP35913 EEF1DP3-203ENST00000566025 782 ntBASIC26.74■■□□□ 1.87
PDE6BP35913 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.74■■□□□ 1.87
PDE6BP35913 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PDE6BP35913 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.73■■□□□ 1.87
PDE6BP35913 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PDE6BP35913 ABCB10P4-201ENST00000566803 2184 ntBASIC26.73■■□□□ 1.87
PDE6BP35913 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PDE6BP35913 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.73■■□□□ 1.87
PDE6BP35913 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC26.73■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms